RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 KLC3Q6P597 504 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 SLCO4C1Q6ZQN7 724 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 CMC1Q7Z7K0 106 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 RPS19BP1Q86WX3 136 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 WDR75Q8IWA0 830 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 KLHDC8AQ8IYD2 350 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 KIF2BQ8N4N8 673 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 FAM47BQ8NA70 645 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 CREB3L4Q8TEY5 395 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 ERP27Q96DN0 273 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 PTCD3Q96EY7 689 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 MCMBPQ9BTE3 642 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 HES7Q9BYE0 225 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 DEFB126Q9BYW3 111 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 REXO4Q9GZR2 422 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 ALG9Q9H6U8 611 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 CLK4Q9HAZ1 481 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 SLCO1B3Q9NPD5 702 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 NECTIN3Q9NQS3 549 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 PNO1Q9NRX1 252 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 THAP1Q9NVV9 213 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 LRFN1Q9P244 771 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 SUCOQ9UBS9 1254 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 TRBV11-1A0A0K0K1C0 115 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 TCRBV16S1A1N1A0A5B0 115 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 WIPF3A6NGB9 483 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 ANKRD65E5RJM6 399 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 CLDN4O14493 209 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 TAPBPO15533 448 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MAN1A2O60476 641 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 PLIN3O60664 434 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 CLEC3AO75596 197 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MYO1DO94832 1006 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 UBOX5O94941 541 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 SNUPNO95149 360 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 WISP3O95389 354 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 SERPINE1P05121 402 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 STSP08842 583 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 SMIM10L1P0DMW3 83 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MYL2P10916 166 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 PCNAP12004 261 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 COL6A2P12110 1019 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 TFEBP19484 476 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MST1P26927 711 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 CERS1P27544 350 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 CRABP2P29373 138 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 GMPRP36959 345 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 CD96P40200 585 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 CASP6P55212 293 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 RAB38P57729 211 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 ALDH6A1Q02252 535 aaKnown RBP9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 IRF8Q02556 426 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 TGM3Q08188 693 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 RCN2Q14257 317 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 TBCCQ15814 346 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MAPKAPK3Q16644 382 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 PAGE2BQ5JRK9 111 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 SPINK14Q6IE38 97 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 SH2D5Q6ZV89 423 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 LRRC70Q7Z2Q7 622 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 GALNTL5Q7Z4T8 443 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 CLNKQ7Z7G1 428 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 PDPRQ8NCN5 879 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MDS2Q8NDY4 140 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 OR2L5Q8NG80 312 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 STAG3L4Q8TBR4 150 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 ELP5Q8TE02 316 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 ADAMTS18Q8TE60 1221 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 THAP3Q8WTV1 239 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 C10orf82Q8WW14 230 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 KIAA1191Q96A73 305 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 TMEM125Q96AQ2 219 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MS4A6EQ96DS6 147 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 SMIM10Q96HG1 83 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MAGED4Q96JG8 741 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 SCYL1Q96KG9 808 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 NPAS2Q99743 824 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 EFCAB11Q9BUY7 163 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 PITHD1Q9GZP4 211 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 AICDAQ9GZX7 198 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 TSPAN10Q9H1Z9 355 aaPredicted RBP9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 NMRAL1Q9HBL8 299 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 PRTFDC1Q9NRG1 225 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 NUDT4Q9NZJ9 180 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 OPTCQ9UBM4 332 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 FBXW2Q9UKT8 454 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 MMACHCQ9Y4U1 282 aa9.04□□□□□ -0.96
NPLOC4-216ENST00000574344 PCNX1Q96RV3 2341 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 HMX2A2RU54 273 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 LRIT2A6NDA9 550 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 TMEM114B3SHH9 223 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 UBXN8O00124 270 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 CCL21O00585 134 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 SH3BGRLO75368 114 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC25A12O75746 678 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 PROCP04070 461 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 IFNA16P05015 189 aa9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 LTA4HP09960 611 aaKnown RBP9.03□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC35E2BP0CK96 405 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms