RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 HMGCS1Q01581 520 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 BTKQ06187 659 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 TBL3Q12788 808 aaKnown RBP11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 STX3Q13277 289 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 MYBPC3Q14896 1274 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 PCOLCEQ15113 449 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 TERF2Q15554 542 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 BTBD16Q32M84 506 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 TCTN3Q6NUS6 607 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 PAPD4Q6PIY7 484 aaKnown RBP11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 SCIMPQ6UWF3 145 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 HPS6Q86YV9 775 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 DDIASQ8IXT1 998 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 OR6Y1Q8NGX8 325 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 FAM76AQ8TAV0 307 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 TWIST2Q8WVJ9 160 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 ABHD17AQ96GS6 310 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 THOC3Q96J01 351 aaKnown RBP11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 LHPPQ9H008 270 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 SLC25A18Q9H1K4 315 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 ADAP2Q9NPF8 381 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 NECTIN3Q9NQS3 549 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 PSME2Q9UL46 239 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 RAP2CQ9Y3L5 183 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 ZNF451Q9Y4E5 1061 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 ATG4BQ9Y4P1 393 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 ASB4Q9Y574 426 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 DNAJC15Q9Y5T4 150 aa11.98□□□□□ -0.49
TRAPPC1-206ENST00000573989 C1orf226A1L170 272 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 TMPRSS11DO60235 418 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 PCDH7O60245 1069 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 SEC22BO75396 215 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 SEC24DO94855 1032 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 SERPINA7P05543 415 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 PRR35P0CG20 571 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 TIA1P31483 386 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 LY6DQ14210 128 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 LACTB2Q53H82 288 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 NDUFAF5Q5TEU4 345 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 VWA5B1Q5TIE3 1220 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 AGAP7PQ5VUJ5 663 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 PLAG1Q6DJT9 500 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 OR52E8Q6IFG1 317 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 GALNT18Q6P9A2 607 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 CLNKQ7Z7G1 428 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 SHISA5Q8N114 240 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 TMEM132CQ8N3T6 1108 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 M1APQ8TC57 530 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 AGR3Q8TD06 166 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 SLC39A7Q92504 469 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 TM9SF4Q92544 642 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 DAZLQ92904 295 aaKnown RBP11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 RBM18Q96H35 190 aaKnown RBP11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 IMMP1LQ96LU5 166 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 AGAP4Q96P64 663 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 PELOQ9BRX2 385 aaKnown RBP11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 ALOXE3Q9BYJ1 711 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 TNFRSF12AQ9NP84 129 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 PNO1Q9NRX1 252 aaKnown RBP11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 SIRT5Q9NXA8 310 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 C5AR2Q9P296 337 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 TEKT2Q9UIF3 430 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 WBP11Q9Y2W2 641 aaKnown RBP11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 CLCA3PQ9Y6N3 262 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 PCSK5Q92824 1860 aa11.97□□□□□ -0.49
TRAPPC1-206ENST00000573989 IGHV3-20A0A0C4DH32 117 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 A0A1W2PR48 441 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 SAGE2PA6NJ88 616 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 NPIPB8E9PQR5 432 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 LDB3O75112 727 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 AIFM1O95831 613 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 ANXA4P09525 319 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 LINC00032P0C843 101 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 CHN1P15882 459 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 TNNI3P19429 210 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 PRPH2P23942 346 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 PIK3R1P27986 724 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 RPL14P50914 215 aaKnown RBP11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 HNRNPFP52597 415 aaKnown RBP11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 EFNA3P52797 238 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 WDR4P57081 412 aaKnown RBP11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 TAS2R50P59544 299 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 PLIN5Q00G26 463 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 HEPACAMQ14CZ8 416 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 NR6A1Q15406 480 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 ELAVL1Q15717 326 aaKnown RBP11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 HSP90B2PQ58FF3 399 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 TTMPQ5BVD1 217 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 C18orf63Q68DL7 685 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 EXD3Q8N9H8 876 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 TMEM52Q8NDY8 209 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 FDCSPQ8NFU4 85 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 DYDC1Q8WWB3 177 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 APIPQ96GX9 242 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 PPP3R2Q96LZ3 170 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 DGAT2Q96PD7 388 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 SMAD5Q99717 465 aaKnown RBP11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 MANSC1Q9H8J5 431 aa11.96□□□□□ -0.49
TRAPPC1-206ENST00000573989 LRTM1Q9HBL6 345 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms