RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ID2Q02363 134 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 TMIGD1Q6UXZ0 262 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 OR5L2Q8NGL0 311 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 ARSGQ96EG1 525 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 EGFL8Q99944 293 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 REXO4Q9GZR2 422 aaKnown RBP18.29■□□□□ 0.52
CCDC40-206ENST00000572083 PLEKHF2Q9H8W4 249 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 COPS7BQ9H9Q2 264 aaPredicted RBP18.29■□□□□ 0.52
CCDC40-206ENST00000572083 MTRF1LQ9UGC7 380 aaKnown RBP18.29■□□□□ 0.52
CCDC40-206ENST00000572083 SYNDIG1LA6NDD5 238 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 NPEPPSL1A6NEC2 478 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 TUBAL3A6NHL2 446 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 LRRC3CA6NJW4 275 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 CTNSO60931 367 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 ETHE1O95571 254 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 TBX6O95947 436 aaPredicted RBP18.28■□□□□ 0.52
CCDC40-206ENST00000572083 HEXAP06865 529 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 C1GALT1C1LP0DN25 315 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 DCAF7P61962 342 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 PCBP2Q15366 365 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCDC40-206ENST00000572083 C18orf21Q32NC0 220 aaPredicted RBP18.28■□□□□ 0.52
CCDC40-206ENST00000572083 FBXL19-AS1Q494R0 122 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 ACSF3Q4G176 576 aaPredicted RBP18.28■□□□□ 0.52
CCDC40-206ENST00000572083 ADNP2Q6IQ32 1131 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 TRIM40Q6P9F5 258 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 PRIMA1Q86XR5 153 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 CNTN4Q8IWV2 1026 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 LIX1Q8N485 282 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 NAT8LQ8N9F0 302 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 TTLQ8NG68 377 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 OR2L5Q8NG80 312 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 NEIL3Q8TAT5 605 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 LINC01560Q8TB33 94 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 KIAA1191Q96A73 305 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 JSRP1Q96MG2 331 aaPredicted RBP18.28■□□□□ 0.52
CCDC40-206ENST00000572083 SERINC2Q96SA4 455 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 MDFIQ99750 246 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 NEUROD4Q9HD90 331 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 ZFP64Q9NPA5 681 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 COPS7AQ9UBW8 275 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 BOKQ9UMX3 212 aaPredicted RBP18.28■□□□□ 0.52
CCDC40-206ENST00000572083 PCDHGB3Q9Y5G1 929 aa18.28■□□□□ 0.52
CCDC40-206ENST00000572083 KIAA1324LA8MWY0 1029 aaPredicted RBP18.27■□□□□ 0.52
CCDC40-206ENST00000572083 CDC7O00311 574 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 WDR47O94967 919 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 LRATO95237 230 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 EPXP11678 715 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 GNAZP19086 355 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 GDF5P43026 501 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 MTTPP55157 894 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 SLC22A10Q63ZE4 541 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 POMZP3Q6PJE2 187 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 SLCO4C1Q6ZQN7 724 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 VN1R5Q7Z5H4 357 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 GABPB2Q8TAK5 448 aaPredicted RBP18.27■□□□□ 0.52
CCDC40-206ENST00000572083 ZNF721Q8TF20 911 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 ZNF395Q9H8N7 513 aaPredicted RBP18.27■□□□□ 0.52
CCDC40-206ENST00000572083 SH2D2AQ9NP31 389 aa18.27■□□□□ 0.52
CCDC40-206ENST00000572083 FOXD3Q9UJU5 478 aaPredicted RBP18.27■□□□□ 0.52
CCDC40-206ENST00000572083 MPDZO75970 2070 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 C15orf38-AP3S2A0A0A6YYH1 394 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 H2AFYO75367 372 aaKnown RBP18.26■□□□□ 0.51
CCDC40-206ENST00000572083 CLEC3AO75596 197 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 CEACAM8P31997 349 aaPredicted RBP18.26■□□□□ 0.51
CCDC40-206ENST00000572083 ZNF136P52737 540 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 RCN2Q14257 317 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 EFTUD2Q15029 972 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCDC40-206ENST00000572083 POU4F3Q15319 338 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 MPEG1Q2M385 716 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 ZNF791Q3KP31 576 aaPredicted RBP18.26■□□□□ 0.51
CCDC40-206ENST00000572083 ADPRMQ3LIE5 342 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 PIGGQ5H8A4 983 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 FAM45BPQ6NSW5 357 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 ABHD17CQ6PCB6 329 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 MAATS1Q7Z4T9 603 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 C9orf40Q8IXQ3 194 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 LRRC25Q8N386 305 aaPredicted RBP18.26■□□□□ 0.51
CCDC40-206ENST00000572083 VWA5B2Q8N398 1253 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 FAM13CQ8NE31 585 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 FAM45AQ8TCE6 357 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 PAQR8Q8TEZ7 354 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 NUDT8Q8WV74 236 aa18.26■□□□□ 0.51
CCDC40-206ENST00000572083 MAGOHBQ96A72 148 aaKnown RBP18.26■□□□□ 0.51
CCDC40-206ENST00000572083 PPANQ9NQ55 473 aaKnown RBP18.26■□□□□ 0.51
CCDC40-206ENST00000572083 ZNF629Q9UEG4 869 aaPredicted RBP18.26■□□□□ 0.51
CCDC40-206ENST00000572083 KIAA1549Q9HCM3 1950 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 ANKDD1BA6NHY2 528 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 CLCA1A8K7I4 914 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 EPPINO95925 133 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 CD53P19397 219 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 AGFG1P52594 562 aaKnown RBP18.25■□□□□ 0.51
CCDC40-206ENST00000572083 NKX6-1P78426 367 aaPredicted RBP18.25■□□□□ 0.51
CCDC40-206ENST00000572083 SERTAD2Q14140 314 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 LYPD8Q6UX82 237 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 LACC1Q8IV20 430 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 KRT78Q8N1N4 520 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 SPC24Q8NBT2 197 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 SLC22A8Q8TCC7 542 aa18.25■□□□□ 0.51
CCDC40-206ENST00000572083 SPACA9Q96E40 222 aaPredicted RBP18.25■□□□□ 0.51
CCDC40-206ENST00000572083 CERS2Q96G23 380 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms