RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SSR4P51571 173 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 PCDH1Q08174 1060 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 KHDRBS2Q5VWX1 349 aaKnown RBP11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 RPTNQ6XPR3 784 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 TAOK1Q7L7X3 1001 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 RELL1Q8IUW5 271 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 SIAH3Q8IW03 269 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 GHDCQ8N2G8 530 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 CPSF7Q8N684 471 aaKnown RBP11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 POGLUT1Q8NBL1 392 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR14A16Q8NHC5 309 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 HUS1BQ8NHY5 278 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 REPS1Q96D71 796 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 CCDC120Q96HB5 630 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 FMO2Q99518 471 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 ALOXE3Q9BYJ1 711 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 VPS11Q9H270 941 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR51B5Q9H339 312 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 DMRT3Q9NQL9 472 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 KCMF1Q9P0J7 381 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 CPSF2Q9P2I0 782 aaKnown RBP11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 TINAGQ9UJW2 476 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF223Q9UK11 482 aaPredicted RBP11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 ERVK-11Q9UQG0 969 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 TNPO3Q9Y5L0 923 aaKnown RBP11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 SCN2AQ99250 2005 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 DIDO1Q9BTC0 2240 aaKnown RBP11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 ITPR2Q14571 2701 aa11.51□□□□□ -0.57
CTDNEP1-205ENST00000570828 MYOCOSA0A1B0GUC4 107 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 A8MVJ9 347 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 KLRC4-KLRK1H3BQV0 150 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 TFECO14948 347 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ASNA1O43681 348 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 LDB3O75112 727 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 WISP2O76076 250 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ESRRAP11474 423 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 COX7A2P14406 83 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ABOP16442 354 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 TNNI3P19429 210 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 CPN2P22792 545 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ARL1P40616 181 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 MEOX1P50221 254 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 GPR143P51810 404 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ID2Q02363 134 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 C3AR1Q16581 482 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 LIPJQ5W064 366 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 HSDL2Q6YN16 418 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 MRGPRGQ86SM5 289 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 RETREG3Q86VR2 466 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF227Q86WZ6 799 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 SPPL2CQ8IUH8 684 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 GPALPP1Q8IXQ4 340 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 SLC34A3Q8N130 599 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 MMGT1Q8N4V1 131 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ZNF808Q8N4W9 903 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 MORN4Q8NDC4 146 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 C7orf57Q8NEG2 295 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ITLN2Q8WWU7 325 aaPredicted RBP11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ASB15Q8WXK1 588 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 IFT81Q8WYA0 676 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 RGMAQ96B86 450 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 MTERF1Q99551 399 aaKnown RBP11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR8D2Q9GZM6 311 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 CDC42EP4Q9H3Q1 356 aaKnown RBP11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 TIMMDC1Q9NPL8 285 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 HPF1Q9NWY4 346 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 MS4A12Q9NXJ0 267 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 COPS7AQ9UBW8 275 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 VTI1BQ9UEU0 232 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 PHF11Q9UIL8 331 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 ENTPD4Q9Y227 616 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 YARS2Q9Y2Z4 477 aaKnown RBP11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 PCDHGA11Q9Y5H2 935 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 MYO9AB2RTY4 2548 aa11.5□□□□□ -0.57
CTDNEP1-205ENST00000570828 C17orf105B2RV13 164 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 H0YIV9 168 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 DYRK3O43781 588 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 PEX1O43933 1283 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 KLK8O60259 260 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 PRKNO60260 465 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 UGDHO60701 494 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR2J2O76002 312 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 TUBB4AP04350 444 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 CTAGE8P0CG41 777 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 TLX1P31314 330 aaPredicted RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 SERPINB9P50453 376 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 PLIN5Q00G26 463 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 SLAMF1Q13291 335 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 ART3Q13508 389 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 GTF2H2Q13888 395 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 PCBP2Q15366 365 aaKnown RBP eCLIP11.49□□□□□ -0.575e-8■■■■□ 23.6
CTDNEP1-205ENST00000570828 CPSF6Q16630 551 aaKnown RBP eCLIP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 TECRLQ5HYJ1 363 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 UBAP2Q5T6F2 1119 aaKnown RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 DEPDC1Q5TB30 811 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 OR4C11Q6IEV9 310 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 GTF2H2CQ6P1K8 395 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 METTL2BQ6P1Q9 378 aaKnown RBP11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 GOLGA7Q7Z5G4 137 aa11.49□□□□□ -0.57
CTDNEP1-205ENST00000570828 SULF2Q8IWU5 870 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms