RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SLC30A8Q8IWU4 369 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 DEFB119Q8N690 84 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 CEP76Q8TAP6 659 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 SLC37A2Q8TED4 501 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 ZDHHC1Q8WTX9 485 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 FIG4Q92562 907 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 RSC1A1Q92681 617 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 NCLNQ969V3 563 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 MS4A6EQ96DS6 147 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 ZBED6CLQ96FA7 236 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-221ENST00000567935 AURKBQ96GD4 344 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-221ENST00000567935 RNF145Q96MT1 663 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 NR1H4Q96RI1 486 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-221ENST00000567935 C9orf16Q9BUW7 83 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 LRRC61Q9BV99 259 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 SLC6A16Q9GZN6 736 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 PIF1Q9H611 641 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 LHX9Q9NQ69 397 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 PRDM9Q9NQV7 894 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 ACSS1Q9NUB1 689 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-221ENST00000567935 DCAF13Q9NV06 445 aaKnown RBP13.87□□□□□ -0.19
COMMD4-221ENST00000567935 LYARQ9NX58 379 aaKnown RBP13.87□□□□□ -0.19
COMMD4-221ENST00000567935 RAB26Q9ULW5 256 aa13.87□□□□□ -0.19
COMMD4-221ENST00000567935 SAMD4AQ9UPU9 718 aaKnown RBP13.87□□□□□ -0.19
COMMD4-221ENST00000567935 A0A0J9YY10 115 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 GSAPA4D1B5 854 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 OR6C74A6NCV1 312 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 YY2O15391 372 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 PDPK1O15530 556 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 DEAF1O75398 565 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 SNRNP200O75643 2136 aaKnown RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 TIPRLO75663 272 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 SERPIND1P05546 499 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 UQCRBP14927 111 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 ZNF10P21506 573 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 HIST1H1TP22492 207 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 UQCRC2P22695 453 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 FRKP42685 505 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 CLCN2P51788 898 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 KCNC4Q03721 635 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 SLC14A1Q13336 389 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 ELOAQ14241 798 aaKnown RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 LRRC36Q1X8D7 754 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 SFT2D3Q587I9 215 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 TOR1AIP1Q5JTV8 583 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 TMTC4Q5T4D3 741 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 ARMC6Q6NXE6 501 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 SPESP1Q6UW49 350 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 GLRX5Q86SX6 157 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 PLD3Q8IV08 490 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 ZZZ3Q8IYH5 903 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 NAGSQ8N159 534 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 ZNF655Q8N720 491 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 CAMKVQ8NCB2 501 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 FAM46DQ8NEK8 389 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 OR52N2Q8NGI0 321 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 ZFP28Q8NHY6 868 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 DNASE2BQ8WZ79 361 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 BDH2Q9BUT1 245 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 ABCG4Q9H172 646 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 TCEAL2Q9H3H9 227 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 RPS6KA6Q9UK32 745 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 USP22Q9UPT9 525 aa13.86□□□□□ -0.19
COMMD4-221ENST00000567935 NUP214P35658 2090 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 MDC1Q14676 2089 aaKnown RBP13.86□□□□□ -0.19
COMMD4-221ENST00000567935 TRBV23OR9-2A0A075B6M9 112 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 FAM149AA5PLN7 773 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 RTCAO00442 366 aaKnown RBP13.85□□□□□ -0.19
COMMD4-221ENST00000567935 ERI3O43414 337 aaKnown RBP13.85□□□□□ -0.19
COMMD4-221ENST00000567935 TMPRSS11DO60235 418 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 C6orf47O95873 294 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 FAM58BPP0C7Q3 252 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 ATP5A1P25705 553 aaKnown RBP13.85□□□□□ -0.19
COMMD4-221ENST00000567935 FASLGP48023 281 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 AQP4P55087 323 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 HNRNPKP61978 463 aaKnown RBP eCLIP13.85□□□□□ -0.19
COMMD4-221ENST00000567935 HBA1P69905 142 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 MC1RQ01726 317 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 HHEXQ03014 270 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 HYAL2Q12891 473 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 RGNQ15493 299 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 WDR45BQ5MNZ6 344 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 MRM1Q6IN84 353 aaKnown RBP13.85□□□□□ -0.19
COMMD4-221ENST00000567935 HMBOX1Q6NT76 420 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 ZCCHC8Q6NZY4 707 aaKnown RBP13.85□□□□□ -0.19
COMMD4-221ENST00000567935 FIGLAQ6QHK4 219 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 C11orf65Q8NCR3 313 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 TM4SF19Q96DZ7 209 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 TEFMQ96QE5 360 aaKnown RBP13.85□□□□□ -0.19
COMMD4-221ENST00000567935 C17orf62Q9BQA9 187 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 CHID1Q9BWS9 393 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 SORBS1Q9BX66 1292 aaKnown RBP13.85□□□□□ -0.19
COMMD4-221ENST00000567935 NLNQ9BYT8 704 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 TM9SF3Q9HD45 589 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 PRDM7Q9NQW5 492 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 TOR4AQ9NXH8 423 aa13.85□□□□□ -0.19
COMMD4-221ENST00000567935 PTPRQQ9UMZ3 2332 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 OR5K3A6NET4 321 aa13.84□□□□□ -0.19
COMMD4-221ENST00000567935 LILRA5A6NI73 299 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms