RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DEPDC1Q5TB30 811 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ZNF468Q5VIY5 522 aaPredicted RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 C1QL3Q5VWW1 255 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 KHDRBS2Q5VWX1 349 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 OR4C11Q6IEV9 310 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 SLC25A25Q6KCM7 469 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 GTF2H2CQ6P1K8 395 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 MTFR2Q6P444 385 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 LYPD8Q6UX82 237 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ZNF793Q6ZN11 406 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 GALNTL5Q7Z4T8 443 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 UBE3DQ7Z6J8 389 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CLNKQ7Z7G1 428 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 FJX1Q86VR8 437 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ZNF227Q86WZ6 799 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CTAGE4Q8IX94 777 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 GPALPP1Q8IXQ4 340 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CYP4Z2PQ8N1L4 340 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ZCCHC7Q8N3Z6 543 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 TMEM156Q8N614 296 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ACOT4Q8N9L9 421 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 POGLUT1Q8NBL1 392 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 MORN4Q8NDC4 146 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 OR8K3Q8NH51 312 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 OR14A16Q8NHC5 309 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 HUS1BQ8NHY5 278 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 DAZLQ92904 295 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 NCLNQ969V3 563 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 RGMAQ96B86 450 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 REPS1Q96D71 796 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 GPR137Q96N19 417 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 FRMD6Q96NE9 622 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 GPR78Q96P69 363 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CSF3RQ99062 836 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PAFAH2Q99487 392 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 MAPKAP1Q9BPZ7 522 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PRR14Q9BWN1 585 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ALOXE3Q9BYJ1 711 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 VPS11Q9H270 941 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 OR51B5Q9H339 312 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 IPPKQ9H8X2 491 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ACTR8Q9H981 624 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 DMRT3Q9NQL9 472 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PNO1Q9NRX1 252 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 MS4A12Q9NXJ0 267 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PSD3Q9NYI0 1048 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CPSF2Q9P2I0 782 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 SUCOQ9UBS9 1254 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 PHF11Q9UIL8 331 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ZNF180Q9UJW8 692 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 ZNF223Q9UK11 482 aaPredicted RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 FBXW2Q9UKT8 454 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 PPT2Q9UMR5 302 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 KLF13Q9Y2Y9 288 aaPredicted RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 YARS2Q9Y2Z4 477 aaKnown RBP4.46□□□□□ -1.7
CLK3-219ENST00000567805 CLCA3PQ9Y6N3 262 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 MYO7BQ6PIF6 2116 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CSMD2Q7Z408 3487 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 TEX15Q9BXT5 2789 aa4.46□□□□□ -1.7
CLK3-219ENST00000567805 CENPEQ02224 2701 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 LRBAP50851 2863 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 PHF3Q92576 2039 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 CSMD1Q96PZ7 3565 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 A0A087WUV0 522 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 TRGV8A0A0C4DH27 118 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 EXOC1LA0A1B0GW35 172 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 LRRC14BA6NHZ5 514 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 TMEM200CA6NKL6 621 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 A8MVJ9 347 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 C17orf105B2RV13 164 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 POC1B-GALNT4F8VUJ3 575 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 KLRC4-KLRK1H3BQV0 150 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 STX16-NPEPL1H3BU86 382 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 FOXE1O00358 373 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 SAP18O00422 153 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 RTCAO00442 366 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 CCL21O00585 134 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 OR7A17O14581 309 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 STX16O14662 325 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ASNA1O43681 348 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 DYRK3O43781 588 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ZG16O60844 167 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 LDB3O75112 727 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SMIM24O75264 130 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SH3BGRLO75368 114 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 OR2J2O76002 312 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SEMA3DO95025 777 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SIX3O95343 332 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 CLDN9O95484 217 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ABHD2P08910 425 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 SNRPAP09012 282 aaKnown RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 COX7A2P14406 83 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 ZNF24P17028 368 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 CPN2P22792 545 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 PTX3P26022 381 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 TLX1P31314 330 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 DCTP40126 519 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 BUD31P41223 144 aaPredicted RBP4.45□□□□□ -1.7
CLK3-219ENST00000567805 SSR4P51571 173 aa4.45□□□□□ -1.7
CLK3-219ENST00000567805 CCNG1P51959 295 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms