RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 LRCH1Q9Y2L9 728 aa10.74□□□□□ -0.69
LINC00562-201ENST00000566385 AP3M1Q9Y2T2 418 aa10.74□□□□□ -0.69
LINC00562-201ENST00000566385 WBP11Q9Y2W2 641 aaKnown RBP10.74□□□□□ -0.69
LINC00562-201ENST00000566385 RNF103-CHMP3A0A140T963 221 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 TMEM229AB2RXF0 380 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 DRD2P14416 443 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 PPM1FP49593 454 aaPredicted RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 FOLH1Q04609 750 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 CHRNB3Q05901 458 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 LRRC74AQ0VAA2 488 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 GK3PQ14409 553 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 SHBQ15464 509 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 FAM98BQ52LJ0 330 aaKnown RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 WDR45BQ5MNZ6 344 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 C6orf52Q5T4I8 152 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 SWT1Q5T5J6 900 aaKnown RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 TMEM214Q6NUQ4 689 aaKnown RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 ISLR2Q6UXK2 745 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 ZBTB49Q6ZSB9 765 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 RBM12BQ8IXT5 1001 aaKnown RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 CBR4Q8N4T8 237 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 TRIML2Q8N7C3 387 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 ANKFN1Q8N957 763 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 SRFBP1Q8NEF9 429 aaKnown RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 OR52E4Q8NGH9 312 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 OTUB1Q96FW1 271 aaPredicted RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 CENPNQ96H22 339 aaPredicted RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 MAGED4Q96JG8 741 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 VCX3BQ9H321 246 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 KLHL3Q9UH77 587 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 MYOCOSA0A1B0GUC4 107 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 OPN1SWP03999 348 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 PROS1P07225 676 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 UQCRBP14927 111 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 CAPZBP47756 277 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 SIGLEC14Q08ET2 396 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 BIRC2Q13490 618 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 ARMC6Q6NXE6 501 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 SLC48A1Q6P1K1 146 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 TNFAIP8L2Q6P589 184 aaPredicted RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 OGFOD3Q6PK18 319 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 OR4N5Q8IXE1 308 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 OR5P2Q8WZ92 322 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 RERGQ96A58 199 aaPredicted RBP10.73□□□□□ -0.69
LINC00562-201ENST00000566385 VPS50Q96JG6 964 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 SEMA6CQ9H3T2 930 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 RNF215Q9Y6U7 377 aa10.73□□□□□ -0.69
LINC00562-201ENST00000566385 ADAMTS9Q9P2N4 1935 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 IGHV5-51A0A0C4DH38 117 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 DLGAP1O14490 977 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 TXNDC9O14530 226 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 CLOCKO15516 846 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 DIRAS1O95057 198 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 MED26O95402 600 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 UQCRC2P22695 453 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 TSFMP43897 325 aaKnown RBP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 NCBP2P52298 156 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 LIM2P55344 173 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 SPIDRQ14159 915 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 GPR19Q15760 415 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 ATP6AP1Q15904 470 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 C14orf28Q4W4Y0 310 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 TMTC4Q5T4D3 741 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 SZRD1Q7Z422 152 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 GATAD2AQ86YP4 633 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 HS3ST5Q8IZT8 346 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 HORMAD2Q8N7B1 307 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 CAMKVQ8NCB2 501 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 NFKBIDQ8NI38 313 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 RAB8BQ92930 207 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 ZBED6CLQ96FA7 236 aaPredicted RBP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 PYURFQ96I23 114 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 C10orf90Q96M02 699 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 TGM7Q96PF1 710 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 FAIM2Q9BWQ8 316 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 UGT2B28Q9BY64 529 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 ASPSCR1Q9BZE9 553 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 SERHL2Q9H4I8 314 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 EHD3Q9NZN3 535 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 LRIT1Q9P2V4 623 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 PADI4Q9UM07 663 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 DAPP1Q9UN19 280 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 HRO43593 1189 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 LDLRP01130 860 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 ALOX12P18054 663 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 PPIBP23284 216 aaKnown RBP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 CCT3P49368 545 aaKnown RBP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 ARFIP1P53367 373 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 SIM1P81133 766 aaPredicted RBP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 CSTF1Q05048 431 aaKnown RBP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 EEF1A2Q05639 463 aaKnown RBP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 TP53BP2Q13625 1128 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 VEZF1Q14119 521 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 SUZ12Q15022 739 aaKnown RBP10.72□□□□□ -0.69
LINC00562-201ENST00000566385 CYP27C1Q4G0S4 372 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 CMPK2Q5EBM0 449 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 LYSMD4Q5XG99 296 aa10.72□□□□□ -0.69
LINC00562-201ENST00000566385 SAXO2Q658L1 398 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms