RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 HPF1Q9NWY4 346 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 NINJ2Q9NZG7 142 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 MTRF1LQ9UGC7 380 aaKnown RBP18.47■□□□□ 0.55
CLN6-206ENST00000565471 ERVK-11Q9UQG0 969 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 CELSR2Q9HCU4 2923 aa18.47■□□□□ 0.55
CLN6-206ENST00000565471 CENPEQ02224 2701 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 CRYBG3Q68DQ2 2970 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 C17orf105B2RV13 164 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 H0YIV9 168 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 SH3BGRLO75368 114 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 TNNI3P19429 210 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 GRNP28799 593 aaKnown RBP18.46■□□□□ 0.55
CLN6-206ENST00000565471 TYK2P29597 1187 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 PIK3CGP48736 1102 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 RAP1GDS1P52306 607 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 PHEXP78562 749 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 HSF1Q00613 529 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 DDX39BQ13838 428 aaKnown RBP18.46■□□□□ 0.55
CLN6-206ENST00000565471 EID3Q8N140 333 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 ZCCHC7Q8N3Z6 543 aaKnown RBP18.46■□□□□ 0.55
CLN6-206ENST00000565471 PSD4Q8NDX1 1056 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 SLC2A12Q8TD20 617 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 PHF10Q8WUB8 498 aaKnown RBP18.46■□□□□ 0.55
CLN6-206ENST00000565471 RGMAQ96B86 450 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 REPS1Q96D71 796 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 RASL10BQ96S79 203 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 OR8D2Q9GZM6 311 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 TSPYL1Q9H0U9 437 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 PHF11Q9UIL8 331 aa18.46■□□□□ 0.55
CLN6-206ENST00000565471 TNPO3Q9Y5L0 923 aaKnown RBP18.46■□□□□ 0.55
CLN6-206ENST00000565471 MYOCOSA0A1B0GUC4 107 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 SAP18O00422 153 aaKnown RBP18.45■□□□□ 0.54
CLN6-206ENST00000565471 PRRG2O14669 202 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 URI1O94763 535 aaPredicted RBP18.45■□□□□ 0.54
CLN6-206ENST00000565471 COX7A2P14406 83 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 HTR1EP28566 365 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 PTGER1P34995 402 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 HK2P52789 917 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 RNF4P78317 190 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 GTF3C1Q12789 2109 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 SLAMF1Q13291 335 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 BIKQ13323 160 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 C16orf47Q6ZP98 133 aaPredicted RBP18.45■□□□□ 0.54
CLN6-206ENST00000565471 FGD2Q7Z6J4 655 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 MYLK4Q86YV6 388 aaPredicted RBP18.45■□□□□ 0.54
CLN6-206ENST00000565471 MMGT1Q8N4V1 131 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 OR5L2Q8NGL0 311 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 AGAP11Q8TF27 550 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 ISL2Q96A47 359 aa18.45■□□□□ 0.54
CLN6-206ENST00000565471 C16orf45Q96MC5 204 aaPredicted RBP18.45■□□□□ 0.54
CLN6-206ENST00000565471 MTERF1Q99551 399 aaKnown RBP18.45■□□□□ 0.54
CLN6-206ENST00000565471 SORBS1Q9BX66 1292 aaKnown RBP18.45■□□□□ 0.54
CLN6-206ENST00000565471 LIN28AQ9H9Z2 209 aaKnown RBP18.45■□□□□ 0.54
CLN6-206ENST00000565471 E9PLN8 166 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 WWP2O00308 870 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 PLPP1O14494 284 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 FGF17O60258 216 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 OR6B1O95007 311 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 ETHE1O95571 254 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 PTX3P26022 381 aaPredicted RBP18.44■□□□□ 0.54
CLN6-206ENST00000565471 RFC3P40938 356 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 SOX3P41225 446 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 STT3AP46977 705 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 GPR85P60893 370 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 TNFRSF17Q02223 184 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 ID2Q02363 134 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 GTF2H2Q13888 395 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 CMPK2Q5EBM0 449 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 TECRLQ5HYJ1 363 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 GTF2H2CQ6P1K8 395 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 GOLGA7Q7Z5G4 137 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 GPR180Q86V85 440 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 DOLPP1Q86YN1 238 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 RNF175Q8N4F7 328 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 ZNF321PQ8N8H1 164 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 L3MBTL4Q8NA19 623 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 ZNF721Q8TF20 911 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 SLC44A1Q8WWI5 657 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 TANKQ92844 425 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 PHF12Q96QT6 1004 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 VKORC1Q9BQB6 163 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 VPS11Q9H270 941 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 RPF2Q9H7B2 306 aaKnown RBP18.44■□□□□ 0.54
CLN6-206ENST00000565471 IPPKQ9H8X2 491 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 PLSCR2Q9NRY7 297 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 DEPPQ9NTK1 212 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 PSD3Q9NYI0 1048 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 COPS7AQ9UBW8 275 aa18.44■□□□□ 0.54
CLN6-206ENST00000565471 LRRC14BA6NHZ5 514 aa18.43■□□□□ 0.54
CLN6-206ENST00000565471 HS6ST1O60243 411 aa18.43■□□□□ 0.54
CLN6-206ENST00000565471 PRF1P14222 555 aa18.43■□□□□ 0.54
CLN6-206ENST00000565471 TLX1P31314 330 aaPredicted RBP18.43■□□□□ 0.54
CLN6-206ENST00000565471 MAGEA12P43365 314 aa18.43■□□□□ 0.54
CLN6-206ENST00000565471 RPS13P62277 151 aaKnown RBP18.43■□□□□ 0.54
CLN6-206ENST00000565471 CUL3Q13618 768 aa18.43■□□□□ 0.54
CLN6-206ENST00000565471 UBAP2Q5T6F2 1119 aaKnown RBP18.43■□□□□ 0.54
CLN6-206ENST00000565471 IL20RBQ6UXL0 311 aa18.43■□□□□ 0.54
CLN6-206ENST00000565471 GOLM1Q8NBJ4 401 aa18.43■□□□□ 0.54
CLN6-206ENST00000565471 FAM57AQ8TBR7 257 aa18.43■□□□□ 0.54
CLN6-206ENST00000565471 DGAT2Q96PD7 388 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms