RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ZNF473Q8WTR7 871 aaKnown RBP17.21■□□□□ 0.35
CLN6-204ENST00000564752 NCLNQ969V3 563 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 ISL2Q96A47 359 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 VMP1Q96GC9 406 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 GPR78Q96P69 363 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 F2RL3Q96RI0 385 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 DMRTA2Q96SC8 542 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 MS4A8Q9BY19 250 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 ROGDIQ9GZN7 287 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 NFU1Q9UMS0 254 aa17.21■□□□□ 0.35
CLN6-204ENST00000564752 CYR61O00622 381 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 KLK8O60259 260 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 CNTFP26441 200 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 MAGEA12P43365 314 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 KIR3DL1P43629 444 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 LIM2P55344 173 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 PCDH1Q08174 1060 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 SLC13A2Q13183 592 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 DDX39BQ13838 428 aaKnown RBP17.2■□□□□ 0.34
CLN6-204ENST00000564752 C3P1Q6ZMU1 363 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 MDGA2Q7Z553 956 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 EID3Q8N140 333 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 CYP4Z2PQ8N1L4 340 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 PLD6Q8N2A8 252 aaKnown RBP17.2■□□□□ 0.34
CLN6-204ENST00000564752 OR7G3Q8NG95 312 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 LURAP1Q96LR2 239 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 ACTR8Q9H981 624 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 ZNF180Q9UJW8 692 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 DAPP1Q9UN19 280 aa17.2■□□□□ 0.34
CLN6-204ENST00000564752 YARS2Q9Y2Z4 477 aaKnown RBP17.2■□□□□ 0.34
CLN6-204ENST00000564752 TNPO3Q9Y5L0 923 aaKnown RBP17.2■□□□□ 0.34
CLN6-204ENST00000564752 ANKRD17O75179 2603 aaKnown RBP17.2■□□□□ 0.34
CLN6-204ENST00000564752 A0A1B0GTH9 108 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 EXOC1LA0A1B0GW35 172 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 LRRC14BA6NHZ5 514 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 TMEM200CA6NKL6 621 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 TFECO14948 347 aaPredicted RBP17.19■□□□□ 0.34
CLN6-204ENST00000564752 PRKNO60260 465 aaPredicted RBP17.19■□□□□ 0.34
CLN6-204ENST00000564752 SH3BGRLO75368 114 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 ZFAND5O76080 213 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 PTGS2P35354 604 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 RFC3P40938 356 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 PIK3CGP48736 1102 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 SSR4P51571 173 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 GTF3C1Q12789 2109 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 PCBP2Q15366 365 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLN6-204ENST00000564752 TSNAXIP1Q2TAA8 658 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 TMEM35AQ53FP2 167 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 CMPK2Q5EBM0 449 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 CHSY3Q70JA7 882 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 ZFP62Q8NB50 900 aaPredicted RBP17.19■□□□□ 0.34
CLN6-204ENST00000564752 FAM57AQ8TBR7 257 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 DCAKDQ8WVC6 231 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 SCYL1Q96KG9 808 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 CSF3RQ99062 836 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 CCDC77Q9BR77 488 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 TBCDQ9BTW9 1192 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 ADAP2Q9NPF8 381 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 PRDM7Q9NQW5 492 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 XPR1Q9UBH6 696 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 ADGRE2Q9UHX3 823 aa17.19■□□□□ 0.34
CLN6-204ENST00000564752 SYNDIG1LA6NDD5 238 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 TRIM49D1C9J1S8 452 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 RTCAO00442 366 aaKnown RBP17.18■□□□□ 0.34
CLN6-204ENST00000564752 HS6ST1O60243 411 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 CTNSO60931 367 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 TGFB1P01137 390 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 ABHD2P08910 425 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 RBP1P09455 135 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 RHOXF2BP0C7M4 288 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 SSR2P43308 183 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 PHEXP78562 749 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 GTF2H2Q13888 395 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 ELAVL1Q15717 326 aaKnown RBP17.18■□□□□ 0.34
CLN6-204ENST00000564752 KHDRBS2Q5VWX1 349 aaKnown RBP17.18■□□□□ 0.34
CLN6-204ENST00000564752 LIPJQ5W064 366 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 GTF2H2CQ6P1K8 395 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 GOLGA7Q7Z5G4 137 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 CLNKQ7Z7G1 428 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 TMEM132CQ8N3T6 1108 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 PTGR2Q8N8N7 351 aaPredicted RBP17.18■□□□□ 0.34
CLN6-204ENST00000564752 HUS1BQ8NHY5 278 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 CMTM7Q96FZ5 175 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 SPOCK3Q9BQ16 436 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 RHOXF2Q9BQY4 288 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 CENPKQ9BS16 269 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 LYRM4Q9HD34 91 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 TIMMDC1Q9NPL8 285 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 ZNF358Q9NW07 568 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 TMCO1Q9UM00 188 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 PPT2Q9UMR5 302 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 HRH3Q9Y5N1 445 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 SPACA6W5XKT8 324 aa17.18■□□□□ 0.34
CLN6-204ENST00000564752 SAP18O00422 153 aaKnown RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 UGDHO60701 494 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 SIX3O95343 332 aaPredicted RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 COL6A2P12110 1019 aa17.17■□□□□ 0.34
CLN6-204ENST00000564752 HIST1H1TP22492 207 aaPredicted RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 ATP5A1P25705 553 aaKnown RBP17.17■□□□□ 0.34
CLN6-204ENST00000564752 ARL1P40616 181 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms