RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 RCN1Q15293 331 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 ZIC1Q15915 447 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 UGT8Q16880 541 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 MTX3Q5HYI7 312 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 OR4C11Q6IEV9 310 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 DLEU7Q6UYE1 221 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 DHFR2Q86XF0 187 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 PTRH1Q86Y79 214 aaKnown RBP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 CARFQ8N187 725 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 BMPERQ8N8U9 685 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 CAMKVQ8NCB2 501 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 WDR48Q8TAF3 677 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 NT5CQ8TCD5 201 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 SLC26A7Q8TE54 656 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 CREB3L4Q8TEY5 395 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 C16orf78Q8WTQ4 265 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 RSC1A1Q92681 617 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 GAL3ST3Q96A11 431 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 RERGQ96A58 199 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 TMEM125Q96AQ2 219 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 COQ8BQ96D53 544 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 RSRC1Q96IZ7 334 aaKnown RBP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 EGLN2Q96KS0 407 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 CCDC115Q96NT0 180 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 PANX1Q96RD7 426 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 SLC38A3Q99624 504 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 KCTD14Q9BQ13 255 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 ZFYVE21Q9BQ24 234 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 ECSITQ9BQ95 431 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 SLC39A3Q9BRY0 314 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 EFHD1Q9BUP0 239 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 FAIM2Q9BWQ8 316 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 VCX3BQ9H321 246 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 DDX31Q9H8H2 851 aaKnown RBP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 COPS7BQ9H9Q2 264 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 APMAPQ9HDC9 416 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 WDR70Q9NW82 654 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 ACTR3BQ9P1U1 418 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 ZNF282Q9UDV7 671 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-203ENST00000564106 MAGEL2Q9UJ55 1249 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 POMT2Q9UKY4 750 aa9.24□□□□□ -0.93
UBFD1-203ENST00000564106 AQP12BA6NM10 295 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 RHPN2P1A8MT19 583 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SAP18O00422 153 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 TXNDC9O14530 226 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 ACOT8O14734 319 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 NVLO15381 856 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 ZSCAN9O15535 394 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 MAP3K7O43318 606 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 AKAP10O43572 662 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SH3BGRLO75368 114 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 UBXN7O94888 489 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SERPIND1P05546 499 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 FURINP09958 794 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 JMJD7P0C870 316 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 DRD2P14416 443 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 TCN1P20061 433 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 DDCP20711 480 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 MAGP20916 626 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 TPP2P29144 1249 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 BSGP35613 385 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 CAPZBP47756 277 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 TAS2R50P59544 299 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 PPP1CAP62136 330 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SKP1P63208 163 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 YBX1P67809 324 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 LIPEQ05469 1076 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SLC34A1Q06495 639 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 C2orf80Q0P641 193 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SLC9A5Q14940 896 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 ZC3H12BQ5HYM0 836 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 IRAK1BP1Q5VVH5 260 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 BROXQ5VW32 411 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 OR4F3Q6IEY1 312 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 FAM71E1Q6IPT2 247 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 LCN8Q6JVE9 175 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 NIPAL1Q6NVV3 410 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 FIGLAQ6QHK4 219 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 CCDC81Q6ZN84 652 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 RNF44Q7L0R7 432 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 ASPGQ86U10 573 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 TMEM126BQ8IUX1 230 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 AQP12AQ8IXF9 295 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 ZCCHC7Q8N3Z6 543 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 RNF148Q8N7C7 305 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 BHLHE22Q8NFJ8 381 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 OR6C4Q8NGE1 309 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 FLVCR1-AS1Q8TAF5 88 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 EXTL1Q92935 676 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 GFM2Q969S9 779 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 PPM1MQ96MI6 270 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 F2RL3Q96RI0 385 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 CCNL2Q96S94 520 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 CD180Q99467 661 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 CTRCQ99895 268 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 THUMPD3Q9BV44 507 aaKnown RBP9.23□□□□□ -0.93
UBFD1-203ENST00000564106 SPATA9Q9BWV2 254 aa9.23□□□□□ -0.93
UBFD1-203ENST00000564106 STRADBQ9C0K7 418 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms