RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CSTF2P33240 577 aaKnown RBP eCLIP9.74□□□□□ -0.85
USP3-219ENST00000561326 TNFRSF17Q02223 184 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 TCF15Q12870 199 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 TRAP1Q12931 704 aaKnown RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 BNIP2Q12982 314 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 CEACAM7Q14002 265 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 KCNAB1Q14722 419 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 MLC1Q15049 377 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 GPR19Q15760 415 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 AASDHQ4L235 1098 aaPredicted RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 ZNF385BQ569K4 471 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 PHF19Q5T6S3 580 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 C18orf63Q68DL7 685 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 OR52E8Q6IFG1 317 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 DGLUCYQ7Z3D6 616 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 HPS6Q86YV9 775 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 NAXDQ8IW45 347 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 C7orf57Q8NEG2 295 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 OR4K14Q8NGD5 310 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 OR9A4Q8NGU2 314 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 STMN2Q93045 179 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 CIDECQ96AQ7 238 aaPredicted RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 MIEF2Q96C03 454 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 SLC39A3Q9BRY0 314 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 INPP5KQ9BT40 448 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 SLC7A5P2Q9GIP4 190 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 MUC13Q9H3R2 512 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 RAD21L1Q9H4I0 556 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 RPF2Q9H7B2 306 aaKnown RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 CUTCQ9NTM9 273 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 AKAP7Q9P0M2 348 aaPredicted RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 SUCOQ9UBS9 1254 aaKnown RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 CD300AQ9UGN4 299 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 POMPQ9Y244 141 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 KIF26BQ2KJY2 2108 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 NINQ8N4C6 2090 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 GPR179Q6PRD1 2367 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 A0A0A6YYC8 382 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 GLOD5A6NK44 160 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 I3L1I5 382 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 SGK494L7N484 410 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 NTN3O00634 580 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 NME4O00746 187 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 CLDN4O14493 209 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 CHST10O43529 356 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 BMP10O95393 424 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 C6orf47O95873 294 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 ABCB1P08183 1280 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 HBQ1P09105 142 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 TCN1P20061 433 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 ALAS2P22557 587 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 UQCRC2P22695 453 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 HTR1EP28566 365 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 GPC1P35052 558 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 CHI3L1P36222 383 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 FRKP42685 505 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 PCBP4P57723 403 aaKnown RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 RAB38P57729 211 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 HBA1P69905 142 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 LIPEQ05469 1076 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 BIKQ13323 160 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 ILKQ13418 452 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 BHLHB9Q6PI77 547 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 DNAJC14Q6Y2X3 702 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 IFNEQ86WN2 208 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 CLECL1Q8IZS7 167 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 CA13Q8N1Q1 262 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 ARHGEF39Q8N4T4 335 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 RNF148Q8N7C7 305 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 PRSS33Q8NF86 280 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 CCDC124Q96CT7 223 aaKnown RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 ASB9Q96DX5 294 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 FAM120BQ96EK7 910 aaKnown RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 MMABQ96EY8 250 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 CCDC74BQ96LY2 380 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 LRGUKQ96M69 825 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 KCTD14Q9BQ13 255 aaPredicted RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 TRIM15Q9C019 465 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 RASSF4Q9H2L5 321 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 ALG2Q9H553 416 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 NEUROD4Q9HD90 331 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 SEMA3GQ9NS98 782 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 CMTM6Q9NX76 183 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 NDOR1Q9UHB4 597 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 CES1P1Q9UKY3 287 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 RARRES3Q9UL19 164 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 SRPK3Q9UPE1 567 aa9.73□□□□□ -0.85
USP3-219ENST00000561326 MRPS2Q9Y399 296 aaKnown RBP9.73□□□□□ -0.85
USP3-219ENST00000561326 TRBV5-3A0A0A0MS03 114 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 PRORSD1PA6NEY8 169 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 ZNF860A6NHJ4 632 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 C4orf47A7E2U8 309 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 MYO1GB0I1T2 1018 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 D6RAR5 112 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 CYR61O00622 381 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 DSCR3O14972 297 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 GSTA4O15217 222 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 FOXS1O43638 330 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 RDH16O75452 317 aa9.72□□□□□ -0.85
USP3-219ENST00000561326 GPR75O95800 540 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms