RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 IZUMO2Q6UXV1 221 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 TMEM64Q6YI46 380 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 PDSS2Q86YH6 399 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 OR6C4Q8NGE1 309 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 ZCCHC10Q8TBK6 192 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 PNPT1Q8TCS8 783 aaKnown RBP16.2■□□□□ 0.18
HDDC3-206ENST00000561036 AMDHD1Q96NU7 426 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 VCXQ9H320 206 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 C8orf4Q9NR00 106 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 SIRT3Q9NTG7 399 aaPredicted RBP16.2■□□□□ 0.18
HDDC3-206ENST00000561036 TMEM74BQ9NUR3 256 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 RPS6KA6Q9UK32 745 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 SAMD4AQ9UPU9 718 aaKnown RBP16.2■□□□□ 0.18
HDDC3-206ENST00000561036 DTNAQ9Y4J8 743 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 SPACA6W5XKT8 324 aa16.2■□□□□ 0.18
HDDC3-206ENST00000561036 RNF103-CHMP3A0A140T963 221 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 H0YJX3 145 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 PGRMC2O15173 223 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 EIF2S1P05198 315 aaKnown RBP16.19■□□□□ 0.18
HDDC3-206ENST00000561036 ALPPL2P10696 532 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 CSNK2A2P19784 350 aaPredicted RBP16.19■□□□□ 0.18
HDDC3-206ENST00000561036 ATP6V1C1P21283 382 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 VSX2P58304 361 aaPredicted RBP16.19■□□□□ 0.18
HDDC3-206ENST00000561036 SKP1P63208 163 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 ELOAQ14241 798 aaKnown RBP16.19■□□□□ 0.18
HDDC3-206ENST00000561036 ATP6AP1Q15904 470 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 PRTGQ2VWP7 1150 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 GRAMD1BQ3KR37 738 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 ZNF528Q3MIS6 628 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 DEFB134Q4QY38 66 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 C18orf63Q68DL7 685 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 KANSL1Q7Z3B3 1105 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 KBTBD2Q8IY47 623 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 SLC35F3Q8IY50 421 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 TMEM105Q8N8V8 129 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 CEP76Q8TAP6 659 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 SFXN5Q8TD22 340 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 NETO1Q8TDF5 533 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 MOAP1Q96BY2 351 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 CENPNQ96H22 339 aaPredicted RBP16.19■□□□□ 0.18
HDDC3-206ENST00000561036 RNF145Q96MT1 663 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 ZNF285Q96NJ3 590 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 MAP3K3Q99759 626 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 CHID1Q9BWS9 393 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 GLIPR2Q9H4G4 154 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 FAM60AQ9NP50 221 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 SEMA3GQ9NS98 782 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 GPATCH2Q9NW75 528 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 THUMPD1Q9NXG2 353 aaKnown RBP16.19■□□□□ 0.18
HDDC3-206ENST00000561036 DAPP1Q9UN19 280 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 FAF1Q9UNN5 650 aaPredicted RBP16.19■□□□□ 0.18
HDDC3-206ENST00000561036 PLCL2Q9UPR0 1127 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 ZNF780BQ9Y6R6 833 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 CACNA1IQ9P0X4 2223 aa16.19■□□□□ 0.18
HDDC3-206ENST00000561036 TMEM131Q92545 1883 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 IGHV1OR21-1A0A087WYE8 117 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 SH3BP5O60239 455 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 GALR3O60755 368 aaPredicted RBP16.18■□□□□ 0.18
HDDC3-206ENST00000561036 SERPINA1P01009 418 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 C1QCP02747 245 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 PNLIPP16233 465 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 CPN2P22792 545 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 KDELR2P33947 212 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 MPIP34949 423 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 CRATP43155 626 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 PRIM2P49643 509 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 LIM2P55344 173 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 TXNL4AP83876 142 aaKnown RBP16.18■□□□□ 0.18
HDDC3-206ENST00000561036 RUNX2Q13950 521 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 SPIDRQ14159 915 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 NDUFA9Q16795 377 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 ZNF630Q2M218 657 aaPredicted RBP16.18■□□□□ 0.18
HDDC3-206ENST00000561036 SPDYE7PQ495Y7 208 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 INTS11Q5TA45 600 aaKnown RBP16.18■□□□□ 0.18
HDDC3-206ENST00000561036 OR52E8Q6IFG1 317 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 HMBOX1Q6NT76 420 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 BHLHB9Q6PI77 547 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 FAM92BQ6ZTR7 304 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 CEP68Q76N32 757 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 RNF130Q86XS8 419 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 PLXDC1Q8IUK5 500 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 CLEC4FQ8N1N0 589 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 ARHGEF39Q8N4T4 335 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 KLHL6Q8WZ60 621 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 PIGKQ92643 395 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 UCN3Q969E3 161 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 AHCYL2Q96HN2 611 aaKnown RBP16.18■□□□□ 0.18
HDDC3-206ENST00000561036 PYURFQ96I23 114 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 BTBD9Q96Q07 612 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 CLK4Q9HAZ1 481 aaKnown RBP16.18■□□□□ 0.18
HDDC3-206ENST00000561036 ENAMQ9NRM1 1142 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 C5AR2Q9P296 337 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 SNX8Q9Y5X2 465 aa16.18■□□□□ 0.18
HDDC3-206ENST00000561036 GON4LQ3T8J9 2241 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 DUX1O43812 170 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 PRKD3O94806 890 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 ZBTB11O95625 1053 aaPredicted RBP16.17■□□□□ 0.18
HDDC3-206ENST00000561036 LDLRP01130 860 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 C9P02748 559 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 ETFAP13804 333 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms