RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 RUNX2Q13950 521 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 HLA-BQ31612 363 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 INAVAQ3KP66 663 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 DEFB134Q4QY38 66 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 CMPK2Q5EBM0 449 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 TBCELQ5QJ74 424 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 WLSQ5T9L3 541 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 GARNL3Q5VVW2 1013 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 SAXO2Q658L1 398 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 OR52E8Q6IFG1 317 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 TMEM64Q6YI46 380 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 ERMP1Q7Z2K6 904 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 PLXDC1Q8IUK5 500 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 FAM181AQ8N9Y4 354 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 ADCY4Q8NFM4 1077 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 ZCCHC10Q8TBK6 192 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 SFXN5Q8TD22 340 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 FIG4Q92562 907 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 AHCYL2Q96HN2 611 aaKnown RBP13.68□□□□□ -0.22
ZEB1-218ENST00000560196 C10orf90Q96M02 699 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 AMDHD1Q96NU7 426 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 DPH2Q9BQC3 489 aaPredicted RBP13.68□□□□□ -0.22
ZEB1-218ENST00000560196 UGT2B28Q9BY64 529 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 GLIPR2Q9H4G4 154 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 TMEM38AQ9H6F2 299 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 CLK4Q9HAZ1 481 aaKnown RBP13.68□□□□□ -0.22
ZEB1-218ENST00000560196 SIRT3Q9NTG7 399 aaPredicted RBP13.68□□□□□ -0.22
ZEB1-218ENST00000560196 GIMAP4Q9NUV9 329 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 GPATCH2Q9NW75 528 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 PADI4Q9UM07 663 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 CACNA1EQ15878 2313 aa13.68□□□□□ -0.22
ZEB1-218ENST00000560196 B4GAT1O43505 415 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 ZBTB11O95625 1053 aaPredicted RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 EIF2S1P05198 315 aaKnown RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 CSNK2A2P19784 350 aaPredicted RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 CPN2P22792 545 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 ALDH4A1P30038 563 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 CHI3L1P36222 383 aaPredicted RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 MLLT3P42568 568 aaPredicted RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 LIM2P55344 173 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 GFERP55789 205 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 OR1D5P58170 312 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 SNRPNP63162 240 aaKnown RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 SKP1P63208 163 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 TRIP10Q15642 601 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 NDUFA9Q16795 377 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 TCTE1Q5JU00 501 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.67□□□□□ -0.225e-6■■□□□ 13.9
ZEB1-218ENST00000560196 C18orf63Q68DL7 685 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 WDR74Q6RFH5 385 aaPredicted RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 FAM92BQ6ZTR7 304 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 DGLUCYQ7Z3D6 616 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 PRSS42Q7Z5A4 293 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 KMT5CQ86Y97 462 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 SLC30A8Q8IWU4 369 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 C11orf65Q8NCR3 313 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 NCSTNQ92542 709 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 UCN3Q969E3 161 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 FAM162AQ96A26 154 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 ZNF681Q96N22 645 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 TGM7Q96PF1 710 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 BBS4Q96RK4 519 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 TACO1Q9BSH4 297 aaKnown RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 KLHL4Q9C0H6 718 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 MAGIXQ9H6Y5 334 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 YY1AP1Q9H869 796 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 PDE7BQ9NP56 450 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 C5AR2Q9P296 337 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 CNOT11Q9UKZ1 510 aaKnown RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 MRPS2Q9Y399 296 aaKnown RBP13.67□□□□□ -0.22
ZEB1-218ENST00000560196 SPACA6W5XKT8 324 aa13.67□□□□□ -0.22
ZEB1-218ENST00000560196 IGHV5-51A0A0C4DH38 117 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 RNF103-CHMP3A0A140T963 221 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 FITM1A5D6W6 292 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 HCRTR1O43613 425 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 KIF1CO43896 1103 aaKnown RBP13.66□□□□□ -0.22
ZEB1-218ENST00000560196 C1QCP02747 245 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 NTRK1P04629 796 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 IFI6P09912 130 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 SP9P0CG40 484 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 RAP2AP10114 183 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 FASP25445 335 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 CD1CP29017 333 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 KDELR2P33947 212 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 SOAT1P35610 550 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 CDK9P50750 372 aaKnown RBP13.66□□□□□ -0.22
ZEB1-218ENST00000560196 CCT8P50990 548 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 TXNL4AP83876 142 aaKnown RBP13.66□□□□□ -0.22
ZEB1-218ENST00000560196 EEF1A2Q05639 463 aaKnown RBP13.66□□□□□ -0.22
ZEB1-218ENST00000560196 FAM53BQ14153 422 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 ELOAQ14241 798 aaKnown RBP13.66□□□□□ -0.22
ZEB1-218ENST00000560196 NR0B2Q15466 257 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 ZNF630Q2M218 657 aaPredicted RBP13.66□□□□□ -0.22
ZEB1-218ENST00000560196 FAM98BQ52LJ0 330 aaKnown RBP13.66□□□□□ -0.22
ZEB1-218ENST00000560196 GCNT6Q5T4J0 391 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 SLC23A3Q6PIS1 610 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 FKBP9P1Q75LS8 142 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 ANKFN1Q8N957 763 aa13.66□□□□□ -0.22
ZEB1-218ENST00000560196 PNPT1Q8TCS8 783 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms