RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FAM71E1Q6IPT2 247 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 PWWP2BQ6NUJ5 590 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 UBE3DQ7Z6J8 389 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 SLC26A7Q8TE54 656 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 UTP15Q8TED0 518 aaKnown RBP15.65■□□□□ 0.1
TPM1-219ENST00000559397 PCDHAC1Q9H158 963 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 LHX9Q9NQ69 397 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 FAM120CQ9NX05 1096 aaKnown RBP15.65■□□□□ 0.1
TPM1-219ENST00000559397 SLC25A37Q9NYZ2 338 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 WBP11Q9Y2W2 641 aaKnown RBP15.65■□□□□ 0.1
TPM1-219ENST00000559397 MRPS2Q9Y399 296 aaKnown RBP15.65■□□□□ 0.1
TPM1-219ENST00000559397 ZNF749O43361 778 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 DNAJA2O60884 412 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 PIM1P11309 404 aaPredicted RBP15.64■□□□□ 0.09
TPM1-219ENST00000559397 GCKP35557 465 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 TRPC1P48995 793 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 ERFP50548 548 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 MAPK10P53779 464 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 AP2B1P63010 937 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 LIPEQ05469 1076 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 SLC34A1Q06495 639 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 COL9A2Q14055 689 aaPredicted RBP15.64■□□□□ 0.09
TPM1-219ENST00000559397 RUNDC3AQ59EK9 446 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 IKBIPQ70UQ0 350 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 PTRH1Q86Y79 214 aaKnown RBP15.64■□□□□ 0.09
TPM1-219ENST00000559397 TTC29Q8NA56 475 aaPredicted RBP15.64■□□□□ 0.09
TPM1-219ENST00000559397 BHLHE22Q8NFJ8 381 aaPredicted RBP15.64■□□□□ 0.09
TPM1-219ENST00000559397 RGMAQ96B86 450 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 TAAR9Q96RI9 348 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 DDA1Q9BW61 102 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 TRIM8Q9BZR9 551 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 REEP4Q9H6H4 257 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 ADAM29Q9UKF5 820 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 WASF3Q9UPY6 502 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 PCDHB3Q9Y5E6 796 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 PCDHGA3Q9Y5H0 932 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 SLC22A7Q9Y694 548 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 SPTBN4Q9H254 2564 aa15.64■□□□□ 0.09
TPM1-219ENST00000559397 H3BNX3 289 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 SCRG1O75711 98 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 LAMP1P11279 417 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ARFIP1P53367 373 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 PLIN5Q00G26 463 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 CAMK2BQ13554 666 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 SELPLGQ14242 412 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 DCAF12Q5T6F0 453 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 CPTPQ5TA50 214 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 YOD1Q5VVQ6 348 aaPredicted RBP15.63■□□□□ 0.09
TPM1-219ENST00000559397 ABHD17CQ6PCB6 329 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 CEACAM20Q6UY09 585 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 PAGE2Q7Z2X7 111 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 HIPK4Q8NE63 616 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 OR2L5Q8NG80 312 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 CDC26Q8NHZ8 85 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ZCCHC10Q8TBK6 192 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 PYDC1Q8WXC3 89 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 GAL3ST3Q96A11 431 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 MTERF3Q96E29 417 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 QRFPRQ96P65 431 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 PRPF18Q99633 342 aaKnown RBP15.63■□□□□ 0.09
TPM1-219ENST00000559397 INPP5KQ9BT40 448 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 SORBS1Q9BX66 1292 aaKnown RBP15.63■□□□□ 0.09
TPM1-219ENST00000559397 MUC13Q9H3R2 512 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ALG2Q9H553 416 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 CUTCQ9NTM9 273 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 AP3M1Q9Y2T2 418 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 B3GALT1Q9Y5Z6 326 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 PRSS51A0A1B0GVH4 220 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 URADA6NGE7 173 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 C9orf172C9J069 976 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ERI3O43414 337 aaKnown RBP15.63■□□□□ 0.09
TPM1-219ENST00000559397 B3GALT4O96024 378 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 GBAP04062 536 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 C8BP07358 591 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 FURINP09958 794 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ZNF888P0CJ79 500 aaPredicted RBP15.63■□□□□ 0.09
TPM1-219ENST00000559397 ANPEPP15144 967 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ZNF28P17035 718 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ALOX12P18054 663 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 HTR1EP28566 365 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 RPL3P39023 403 aaKnown RBP15.63■□□□□ 0.09
TPM1-219ENST00000559397 ARSFP54793 590 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 TAS2R50P59544 299 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 RAB8AP61006 207 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 FOXC1Q12948 553 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 FAM53BQ14153 422 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 FAM214AQ32MH5 1076 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ZFP1Q6P2D0 407 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ABHD13Q7L211 337 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 R3HCC1LQ7Z5L2 792 aaKnown RBP15.63■□□□□ 0.09
TPM1-219ENST00000559397 TMEM126BQ8IUX1 230 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 DTWD1Q8N5C7 304 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 SLC38A9Q8NBW4 561 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 CCDC115Q96NT0 180 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 SH3GL1Q99961 368 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 CENPKQ9BS16 269 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 ZPBPQ9BS86 351 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 NDC1Q9BTX1 674 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 DUSP26Q9BV47 211 aa15.63■□□□□ 0.09
TPM1-219ENST00000559397 BHLHE41Q9C0J9 482 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms