RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TBC1D19Q8N5T2 526 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 MFSD9Q8NBP5 474 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 CAMKVQ8NCB2 501 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ZNF740Q8NDX6 193 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ZNF483Q8TF39 744 aaPredicted RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 CCT6BQ92526 530 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 TSLPQ969D9 159 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 SNF8Q96H20 258 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 DHRS1Q96LJ7 313 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 TAAR6Q96RI8 345 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 CYTH2Q99418 400 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 OLFM1Q99784 485 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 TUBB6Q9BUF5 446 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ZNF700Q9H0M5 742 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 PCBD2Q9H0N5 130 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 ACBD3Q9H3P7 528 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 GRPEL1Q9HAV7 217 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 C19orf25Q9UFG5 118 aaPredicted RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 TEKT2Q9UIF3 430 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 IKZF3Q9UKT9 509 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 USP9YO00507 2555 aaPredicted RBP6.89□□□□□ -1.31
SPG11-213ENST00000558988 MAST4O15021 2626 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 FLNCQ14315 2725 aa6.89□□□□□ -1.31
SPG11-213ENST00000558988 LOC102723996A0A087X1L8 192 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 A0A0G2JN53 185 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 OR5H15A6NDH6 313 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 NCF1BA6NI72 391 aaPredicted RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 A8MUA0 341 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 NCF1CA8MVU1 366 aaPredicted RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 EFCAB8A8MWE9 144 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 PRSS44E7EML9 344 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 EIF3FO00303 357 aaPredicted RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 SLC16A5O15375 505 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 PRAMEF2O60811 474 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 DNAJB6O75190 326 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 SNRPB2P08579 225 aaKnown RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 IMPDH2P12268 514 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 ICAM2P13598 275 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 NCF1P14598 390 aaPredicted RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 NPPBP16860 134 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 KRT4P19013 534 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 FDXRP22570 491 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 CCND1P24385 295 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 MST1P26927 711 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 SLC12A2P55011 1212 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 ARL4CP56559 192 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 OR4D2P58180 307 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 RGS1Q08116 209 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 FASTKD3Q14CZ7 662 aaKnown RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 C18orf21Q32NC0 220 aaPredicted RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 FBXO48Q5FWF7 155 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 ZNF766Q5HY98 468 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 TOR1AIP1Q5JTV8 583 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 DUPD1Q68J44 220 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 FAM45BPQ6NSW5 357 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 PAPD4Q6PIY7 484 aaKnown RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 TMEM205Q6UW68 189 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 LCTLQ6UWM7 567 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 KIAA0408Q6ZU52 694 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 FRA10AC1Q70Z53 315 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 STRA8Q7Z7C7 330 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 CRLF3Q8IUI8 442 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 SPATA6LQ8N4H0 392 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 FBXO36Q8NEA4 188 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 FAM45AQ8TCE6 357 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 NR4A3Q92570 626 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 EXT2Q93063 718 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 NEIL2Q969S2 332 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 OR4K3Q96R72 315 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 WDR83Q9BRX9 315 aaKnown RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 HAUS8Q9BT25 410 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 NAT9Q9BTE0 207 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 HES7Q9BYE0 225 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 DPH5Q9H2P9 285 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 SPNS1Q9H2V7 528 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 ABI3Q9P2A4 366 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 TMEFF2Q9UIK5 374 aaPredicted RBP6.88□□□□□ -1.31
SPG11-213ENST00000558988 VWA7Q9Y334 891 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 PSAT1Q9Y617 370 aa6.88□□□□□ -1.31
SPG11-213ENST00000558988 KCNE1BA0A087WTH5 132 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 TRBC2A0A5B9 178 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 CTAGE15A4D2H0 777 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 GABRR3A8MPY1 467 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 NPIPA5E9PKD4 350 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 PSMD12O00232 456 aaPredicted RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 CCL21O00585 134 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 CLGNO14967 610 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 ZNHIT1O43257 154 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 CHST10O43529 356 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 CYP7B1O75881 506 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 WDR47O94967 919 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 TSPAN12O95859 305 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 CRYABP02511 175 aaKnown RBP6.87□□□□□ -1.31
SPG11-213ENST00000558988 MYBL2P10244 700 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 ALOX12P18054 663 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 MAOAP21397 527 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 PAFAH1B1P43034 410 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 AP1S2P56377 157 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 TAS2R50P59544 299 aa6.87□□□□□ -1.31
SPG11-213ENST00000558988 AP2B1P63010 937 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms