RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 IRF8Q02556 426 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 CHIT1Q13231 466 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 ACAP2Q15057 778 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 TBCCQ15814 346 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 ADPRMQ3LIE5 342 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 PLEKHN1Q494U1 663 aaPredicted RBP5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 PRR30Q53SZ7 412 aaPredicted RBP5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 XKR6Q5GH73 641 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 Q6ZS92 163 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 TRMT10CQ7L0Y3 403 aaKnown RBP5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 NDUFAF7Q7L592 441 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 ANKRD37Q7Z713 158 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 KBTBD2Q8IY47 623 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 MFSD4AQ8N468 514 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 TTLQ8NG68 377 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 PNPLA2Q96AD5 504 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 MIB2Q96AX9 1013 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 TBC1D20Q96BZ9 403 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 MS4A6EQ96DS6 147 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 COX4I2Q96KJ9 171 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 IMMP1LQ96LU5 166 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 WDR77Q9BQA1 342 aaPredicted RBP5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 EFCAB11Q9BUY7 163 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 PITHD1Q9GZP4 211 aaPredicted RBP5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 OPTCQ9UBM4 332 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 POLEQ07864 2286 aa5.66□□□□□ -1.5
CTDSPL2-204ENST00000558966 UTP20O75691 2785 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 EXOC1LA0A1B0GW35 172 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 URADA6NGE7 173 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 ANKDD1BA6NHY2 528 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 MAGEB17A8MXT2 336 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 ERI3O43414 337 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 KLHL41O60662 606 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 KRT38O76015 456 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 SEC24DO94855 1032 aaPredicted RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 SIX3O95343 332 aaPredicted RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 F13BP05160 661 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 SERPINA7P05543 415 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 FHP07954 510 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 ITGAMP11215 1152 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 GFAPP14136 432 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 IL10P22301 178 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 ALDH18A1P54886 795 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 STXBP1P61764 594 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 SKP1P63208 163 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 RUNX2Q13950 521 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 ABRAXAS2Q15018 415 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 PFKFB4Q16877 469 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 CYP27C1Q4G0S4 372 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 TEX35Q5T0J7 233 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 AGAP7PQ5VUJ5 663 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 IRAK1BP1Q5VVH5 260 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 NIPAL1Q6NVV3 410 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 KLC3Q6P597 504 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 TAOK1Q7L7X3 1001 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 CPEB2Q7Z5Q1 589 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 CUZD1Q86UP6 607 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 LAS2Q8IYD9 372 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 CA13Q8N1Q1 262 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 SIRT6Q8N6T7 355 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 TEX9Q8N6V9 391 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 PLPP5Q8NEB5 264 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 BRIX1Q8TDN6 353 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 PPP4R1Q8TF05 950 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZNF473Q8WTR7 871 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 METTL21AQ8WXB1 218 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 CCT6BQ92526 530 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 AGAP4Q96P64 663 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 QRFPRQ96P65 431 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 TUBB6Q9BUF5 446 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 RHBGQ9H310 441 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 CLMPQ9H6B4 373 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 PRR13Q9NZ81 148 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 CPSF2Q9P2I0 782 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 XPR1Q9UBH6 696 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 B3GNT3Q9Y2A9 372 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 SF3B6Q9Y3B4 125 aaKnown RBP5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 IKBKGQ9Y6K9 419 aa5.65□□□□□ -1.5
CTDSPL2-204ENST00000558966 IGKV3D-11A0A0A0MRZ8 115 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 FAM227AF5H4B4 570 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 E2F3O00716 465 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 B4GALT2O60909 372 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 CD3EP07766 207 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 SNRPAP09012 282 aaKnown RBP5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 SBK3P0C264 359 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 RNH1P13489 461 aaKnown RBP5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 MAOAP21397 527 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 JAK1P23458 1154 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 CNTFP26441 200 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 CERS1P27544 350 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 HNRNPFP52597 415 aaKnown RBP5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 PLA2G16P53816 162 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 BTN3A2P78410 334 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 BTG2P78543 158 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 MFAP5Q13361 173 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 LAPTM5Q13571 262 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 SLC29A2Q14542 456 aa5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 PCBP2Q15366 365 aaKnown RBP eCLIP5.64□□□□□ -1.511e-6■■■■■ 27.4
CTDSPL2-204ENST00000558966 INPP5JQ15735 1006 aaPredicted RBP5.64□□□□□ -1.51
CTDSPL2-204ENST00000558966 SFT2D3Q587I9 215 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms