RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 LRFN5Q96NI6 719 aa17.05■□□□□ 0.32
CLPX-203ENST00000558958 DUSP26Q9BV47 211 aa17.05■□□□□ 0.32
CLPX-203ENST00000558958 RPF2Q9H7B2 306 aaKnown RBP17.05■□□□□ 0.32
CLPX-203ENST00000558958 ATAD3AQ9NVI7 634 aa17.05■□□□□ 0.32
CLPX-203ENST00000558958 C5AR2Q9P296 337 aa17.05■□□□□ 0.32
CLPX-203ENST00000558958 SATB2Q9UPW6 733 aa17.05■□□□□ 0.32
CLPX-203ENST00000558958 PCDHGA3Q9Y5H0 932 aa17.05■□□□□ 0.32
CLPX-203ENST00000558958 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 BBIP1A8MTZ0 92 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 FBP2O00757 339 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 SCN2BO60939 215 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 KIAA0754O94854 1291 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 ESRRAP11474 423 aaPredicted RBP17.04■□□□□ 0.32
CLPX-203ENST00000558958 DDX5P17844 614 aaKnown RBP17.04■□□□□ 0.32
CLPX-203ENST00000558958 CALB2P22676 271 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 XCR1P46094 333 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 DCDP81605 110 aaKnown RBP17.04■□□□□ 0.32
CLPX-203ENST00000558958 ACTN3Q08043 901 aaPredicted RBP17.04■□□□□ 0.32
CLPX-203ENST00000558958 MPEG1Q2M385 716 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 ARHGAP40Q5TG30 622 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 OR4F3Q6IEY1 312 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 OR52E8Q6IFG1 317 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 MSANTD1Q6ZTZ1 278 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 CCDC121Q6ZUS5 278 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 TMEM52Q8NDY8 209 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 OR52E6Q96RD3 313 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 ULBP3Q9BZM4 244 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 BHLHE41Q9C0J9 482 aaPredicted RBP17.04■□□□□ 0.32
CLPX-203ENST00000558958 SLC22A11Q9NSA0 550 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 TRPC4Q9UBN4 977 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 UTS2RQ9UKP6 389 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 NDUFAF1Q9Y375 327 aa17.04■□□□□ 0.32
CLPX-203ENST00000558958 DCDC2BA2VCK2 349 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 BLACEA4D250 179 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 MEN1O00255 615 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 ANGPT2O15123 496 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 CPA2P48052 419 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 HNRNPFP52597 415 aaKnown RBP17.03■□□□□ 0.32
CLPX-203ENST00000558958 NKAIN1Q4KMZ8 207 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 COQ5Q5HYK3 327 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 MED25Q71SY5 747 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 COX15Q7KZN9 410 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 TMPRSS7Q7RTY8 843 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 RETREG3Q86VR2 466 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 NATD1Q8N6N6 113 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 TANKQ92844 425 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 EXOSC8Q96B26 276 aaKnown RBP17.03■□□□□ 0.32
CLPX-203ENST00000558958 TBC1D20Q96BZ9 403 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 OR1F2PQ96R84 312 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 SLC35C2Q9NQQ7 365 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 FAM120CQ9NX05 1096 aaKnown RBP17.03■□□□□ 0.32
CLPX-203ENST00000558958 LEF1Q9UJU2 399 aaPredicted RBP17.03■□□□□ 0.32
CLPX-203ENST00000558958 PSME2Q9UL46 239 aa17.03■□□□□ 0.32
CLPX-203ENST00000558958 MRPS33Q9Y291 106 aaKnown RBP17.03■□□□□ 0.32
CLPX-203ENST00000558958 FER1L5A0AVI2 2057 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 C9orf172C9J069 976 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 FHP07954 510 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 IL10P22301 178 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 MNAT1P51948 309 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 MMEL1Q495T6 779 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 PAGE3Q5JUK9 113 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 ANXA8L1Q5VT79 327 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 REP15Q6BDI9 236 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 SLC2A7Q6PXP3 512 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 MARCH9Q86YJ5 346 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 ZNF595Q8IYB9 648 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 CIDECQ96AQ7 238 aaPredicted RBP17.02■□□□□ 0.32
CLPX-203ENST00000558958 KLHL29Q96CT2 875 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 RCN3Q96D15 328 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 NPAS2Q99743 824 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 DPH2Q9BQC3 489 aaPredicted RBP17.02■□□□□ 0.32
CLPX-203ENST00000558958 YIPF2Q9BWQ6 316 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 RBCK1Q9BYM8 510 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 MKKSQ9NPJ1 570 aaPredicted RBP17.02■□□□□ 0.32
CLPX-203ENST00000558958 PCDHGA8Q9Y5G5 932 aa17.02■□□□□ 0.32
CLPX-203ENST00000558958 PRSS51A0A1B0GVH4 220 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 RNASET2O00584 256 aaKnown RBP17.01■□□□□ 0.31
CLPX-203ENST00000558958 MRASO14807 208 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 STK17BO94768 372 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 UNC5CO95185 931 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 FRKP42685 505 aaPredicted RBP17.01■□□□□ 0.31
CLPX-203ENST00000558958 PCBP4P57723 403 aaKnown RBP17.01■□□□□ 0.31
CLPX-203ENST00000558958 ERV3-1Q14264 604 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 MAPKAPK3Q16644 382 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 SPRED3Q2MJR0 410 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 TMEM164Q5U3C3 297 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 FAM180BQ6P0A1 224 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 ZC3H7AQ8IWR0 971 aaKnown RBP17.01■□□□□ 0.31
CLPX-203ENST00000558958 DPP10Q8N608 796 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 VPS37AQ8NEZ2 397 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 GTF2H4Q92759 462 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 CNRIP1Q96F85 164 aaPredicted RBP17.01■□□□□ 0.31
CLPX-203ENST00000558958 SPRY4Q9C004 299 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 B3GNT4Q9C0J1 378 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 RMND5AQ9H871 391 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 POLR1BQ9H9Y6 1135 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 EFCAB1Q9HAE3 211 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 LANCL2Q9NS86 450 aa17.01■□□□□ 0.31
CLPX-203ENST00000558958 MAP10Q9P2G4 905 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms