RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 FAM13CQ8NE31 585 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 OR10G3Q8NGC4 313 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 GABPB2Q8TAK5 448 aaPredicted RBP8.51□□□□□ -1.05
NEDD1-211ENST00000557454 STYXQ8WUJ0 223 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 KAT2AQ92830 837 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 SPACA9Q96E40 222 aaPredicted RBP8.51□□□□□ -1.05
NEDD1-211ENST00000557454 UCN2Q96RP3 112 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 TRAF4Q9BUZ4 470 aaPredicted RBP8.51□□□□□ -1.05
NEDD1-211ENST00000557454 NTMT1Q9BV86 223 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 UBQLN3Q9H347 655 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 ADAP2Q9NPF8 381 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 TMEM184CQ9NVA4 438 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 TRHDEQ9UKU6 1024 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 RNF115Q9Y4L5 304 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 CLDN16Q9Y5I7 305 aa8.51□□□□□ -1.05
NEDD1-211ENST00000557454 CHCHD2Q9Y6H1 151 aaPredicted RBP8.51□□□□□ -1.05
NEDD1-211ENST00000557454 MED12LQ86YW9 2145 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 A0A0A6YYJ9 748 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 LRRC53A6NM62 1247 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 SLCO1B7G3V0H7 640 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 NDUFS4O43181 175 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 CEP104O60308 925 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 TRIM3O75382 744 aaPredicted RBP8.5□□□□□ -1.05
NEDD1-211ENST00000557454 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
NEDD1-211ENST00000557454 STK10O94804 968 aaKnown RBP8.5□□□□□ -1.05
NEDD1-211ENST00000557454 TGM6O95932 706 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 FTCDO95954 541 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 CD8AP01732 235 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 KRT1P04264 644 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 TBXA2RP21731 343 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 SKP1P63208 163 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 SEMA3AQ14563 771 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 TOMM20Q15388 145 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 PHKG1Q16816 387 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 GPSM1Q86YR5 675 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 TC2NQ8N9U0 490 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 FAM216AQ8WUB2 273 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 ZNF480Q8WV37 535 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 FAM168AQ92567 244 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 HTRA1Q92743 480 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 QKIQ96PU8 341 aaKnown RBP eCLIP8.5□□□□□ -1.05
NEDD1-211ENST00000557454 PKP2Q99959 881 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 ZNF747Q9BV97 191 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 OR8D2Q9GZM6 311 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 C10orf88Q9H8K7 445 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.5□□□□□ -1.05
NEDD1-211ENST00000557454 PIH1D1Q9NWS0 290 aaKnown RBP8.5□□□□□ -1.05
NEDD1-211ENST00000557454 CNOT11Q9UKZ1 510 aaKnown RBP8.5□□□□□ -1.05
NEDD1-211ENST00000557454 B3GALT5Q9Y2C3 310 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 C15orf41Q9Y2V0 281 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 MMACHCQ9Y4U1 282 aa8.5□□□□□ -1.05
NEDD1-211ENST00000557454 MYOCOSA0A1B0GUC4 107 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 ZNF839A8K0R7 811 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 LINC01387J3KSC0 135 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 NRDCO43847 1150 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 GOT2P00505 430 aaKnown RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 TGFAP01135 160 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 CHRM3P20309 590 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 PTNP21246 168 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 NR2C2P49116 596 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 TBL3Q12788 808 aaKnown RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 GGTLC2Q14390 218 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 ELAVL1Q15717 326 aaKnown RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 EXOC3L2Q2M3D2 409 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 FBLN7Q53RD9 439 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 PIGGQ5H8A4 983 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 CT47A1Q5JQC4 288 aaPredicted RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 BICRALQ6AI39 1079 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 PTRHD1Q6GMV3 140 aaKnown RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 ITPRIPL1Q6GPH6 555 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 ALKBH2Q6NS38 261 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 BZW1Q7L1Q6 419 aaKnown RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 CLNKQ7Z7G1 428 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 YRDCQ86U90 279 aaKnown RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 VSIG1Q86XK7 387 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 CA13Q8N1Q1 262 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 TMEM132CQ8N3T6 1108 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 C10orf105Q8TEF2 133 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 ATL1Q8WXF7 558 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 HAUS1Q96CS2 278 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 REPS1Q96D71 796 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 C11orf24Q96F05 449 aaPredicted RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 GNRHR2Q96P88 292 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 ALS2CR12Q96Q35 445 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 TTC1Q99614 292 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 FERMT1Q9BQL6 677 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 ARNT2Q9HBZ2 717 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 CNIH4Q9P003 139 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 FEZ2Q9UHY8 353 aaPredicted RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 ZNF148Q9UQR1 794 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 AAR2Q9Y312 384 aaKnown RBP8.49□□□□□ -1.05
NEDD1-211ENST00000557454 CLCA3PQ9Y6N3 262 aa8.49□□□□□ -1.05
NEDD1-211ENST00000557454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.48□□□□□ -1.05
NEDD1-211ENST00000557454 LGALS16A8MUM7 142 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 ACTL6AO96019 429 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 CGAP01215 116 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 IFNA16P05015 189 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 SERPIND1P05546 499 aa8.48□□□□□ -1.05
NEDD1-211ENST00000557454 CRHP06850 196 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms