RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CMPK2Q5EBM0 449 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 KHDRBS2Q5VWX1 349 aaKnown RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 C8orf74Q6P047 294 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 SYT10Q6XYQ8 523 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 C3P1Q6ZMU1 363 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 C16orf47Q6ZP98 133 aaPredicted RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 NCCRP1Q6ZVX7 275 aaPredicted RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 ZNF572Q7Z3I7 529 aaPredicted RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 FGD2Q7Z6J4 655 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 UBE3DQ7Z6J8 389 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 CENPLQ8N0S6 344 aaPredicted RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 OR7G3Q8NG95 312 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 OR8K3Q8NH51 312 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 RHEBL1Q8TAI7 183 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 FAM57AQ8TBR7 257 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 SLC2A12Q8TD20 617 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 PTPMT1Q8WUK0 201 aaPredicted RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 MTFMTQ96DP5 389 aaKnown RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 DMRTA2Q96SC8 542 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 CENPKQ9BS16 269 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 LIN28AQ9H9Z2 209 aaKnown RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 ADGRE2Q9UHX3 823 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 ANGPTL3Q9Y5C1 460 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNX6-210ENST00000557341 CELSR1Q9NYQ6 3014 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 FREM3P0C091 2139 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 MYOCOSA0A1B0GUC4 107 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 CCDC189A1A4V9 331 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 ACOT7O00154 380 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 WWP2O00308 870 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 SAP18O00422 153 aaKnown RBP13.15□□□□□ -0.3
SNX6-210ENST00000557341 SH3BGRLO75368 114 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 OR6B1O95007 311 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 SNRPB2P08579 225 aaKnown RBP13.15□□□□□ -0.3
SNX6-210ENST00000557341 MTHFD2P13995 350 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 GFAPP14136 432 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 COX7A2P14406 83 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 CPN2P22792 545 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 PHEXP78562 749 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 IRF9Q00978 393 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 CKAP4Q07065 602 aaKnown RBP13.15□□□□□ -0.3
SNX6-210ENST00000557341 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 TRADDQ15628 312 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 FAM83EQ2M2I3 478 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 MROH9Q5TGP6 573 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 ARHGAP11AQ6P4F7 1023 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 IL20RBQ6UXL0 311 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 CD163Q86VB7 1156 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 MYLK4Q86YV6 388 aaPredicted RBP13.15□□□□□ -0.3
SNX6-210ENST00000557341 C17orf53Q8N3J3 647 aaPredicted RBP13.15□□□□□ -0.3
SNX6-210ENST00000557341 TEX9Q8N6V9 391 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 KCTD4Q8WVF5 259 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 DMRT3Q9NQL9 472 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 SNX15Q9NRS6 342 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 PLSCR2Q9NRY7 297 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 MS4A12Q9NXJ0 267 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 COQ3Q9NZJ6 369 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 PHF11Q9UIL8 331 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 PPT2Q9UMR5 302 aa13.15□□□□□ -0.3
SNX6-210ENST00000557341 INTS1Q8N201 2190 aaKnown RBP13.14□□□□□ -0.31
SNX6-210ENST00000557341 ESYT3A0FGR9 886 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 ADAM10O14672 748 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 DYRK3O43781 588 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 FGF17O60258 216 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 PIK3CBP42338 1070 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 SERPINB8P50452 374 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 ALDH18A1P54886 795 aaKnown RBP13.14□□□□□ -0.31
SNX6-210ENST00000557341 RNF4P78317 190 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 IGLV3-21P80748 117 aaPredicted RBP13.14□□□□□ -0.31
SNX6-210ENST00000557341 PLIN5Q00G26 463 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 TNFRSF17Q02223 184 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 PLGLB1Q02325 96 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 ID2Q02363 134 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 GUCY2DQ02846 1103 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 CDSNQ15517 529 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 DEPDC1Q5TB30 811 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 LIPJQ5W064 366 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 OR4C11Q6IEV9 310 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 KLC3Q6P597 504 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 PAOXQ6QHF9 649 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 OPN5Q6U736 354 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 RTL4Q6ZR62 310 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 GK5Q6ZS86 529 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 ZNF321PQ8N8H1 164 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 GOLM1Q8NBJ4 401 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 OR2M7Q8NG81 312 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 OR52N2Q8NGI0 321 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 OR5L2Q8NGL0 311 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 HUS1BQ8NHY5 278 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 CA5BP1Q8WTZ4 195 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 SREK1Q8WXA9 508 aaKnown RBP13.14□□□□□ -0.31
SNX6-210ENST00000557341 RGMAQ96B86 450 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 ANKRD9Q96BM1 317 aaPredicted RBP13.14□□□□□ -0.31
SNX6-210ENST00000557341 REPS1Q96D71 796 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 DGAT2Q96PD7 388 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 TRIM8Q9BZR9 551 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 OR51B5Q9H339 312 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 ACTR8Q9H981 624 aa13.14□□□□□ -0.31
SNX6-210ENST00000557341 DEPPQ9NTK1 212 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms