RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 KDM4EB2RXH2 506 aaPredicted RBP8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 CTNSO60931 367 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 AHSGP02765 367 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 ENO2P09104 434 aaPredicted RBP8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 CCDC175P0C221 793 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 EPXP11678 715 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 TNNI3P19429 210 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF10P21506 573 aaPredicted RBP8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 CERS1P27544 350 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 CXCR5P32302 372 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 LIM2P55344 173 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 KCNJ2P63252 427 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 ASPHQ12797 758 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 CRYMQ14894 314 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 PCBP2Q15366 365 aaKnown RBP eCLIP8.32□□□□□ -1.081e-323■■■□□ 15.5
HNRNPC-227ENST00000556897 FBXL19-AS1Q494R0 122 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 PRAMEF20Q5VT98 475 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 TTC27Q6P3X3 843 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 TMIGD1Q6UXZ0 262 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 PRIMA1Q86XR5 153 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 FBXW8Q8N3Y1 598 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 GPATCH11Q8N954 259 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 OR5L2Q8NGL0 311 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 OR8K3Q8NH51 312 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 OR14A16Q8NHC5 309 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 LINC01560Q8TB33 94 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 SLC2A12Q8TD20 617 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 QRFPRQ96P65 431 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 PLEKHF2Q9H8W4 249 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 NEUROD4Q9HD90 331 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 HOMER3Q9NSC5 361 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 SLC17A6Q9P2U8 582 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 MTRF1LQ9UGC7 380 aaKnown RBP8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 DAPP1Q9UN19 280 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 PCDHGB3Q9Y5G1 929 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 NINQ8N4C6 2090 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 NCKAP5O14513 1909 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 FREM3P0C091 2139 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 COL6A5A8TX70 2615 aa8.32□□□□□ -1.08
HNRNPC-227ENST00000556897 HIVEP2P31629 2446 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 C15orf38-AP3S2A0A0A6YYH1 394 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 LRRC3CA6NJW4 275 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 LDB3O75112 727 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ETHE1O95571 254 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 TBX6O95947 436 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 HEXAP06865 529 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 C1GALT1C1LP0DN25 315 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 PGAM1P18669 254 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 GNAZP19086 355 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 GDF5P43026 501 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 TRPC1P48995 793 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 MTTPP55157 894 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 DCAF7P61962 342 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 NKX6-1P78426 367 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ID2Q02363 134 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 SLBPQ14493 270 aaKnown RBP eCLIP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 EFTUD2Q15029 972 aaKnown RBP eCLIP8.31□□□□□ -1.081e-6■■■■■ 29.7
HNRNPC-227ENST00000556897 POU4F3Q15319 338 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 PPP1R3AQ16821 1122 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 MPEG1Q2M385 716 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF791Q3KP31 576 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ACSF3Q4G176 576 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 SLC22A10Q63ZE4 541 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ADNP2Q6IQ32 1131 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 TRIM40Q6P9F5 258 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 POMZP3Q6PJE2 187 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ADGRD1Q6QNK2 874 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 SLCO4C1Q6ZQN7 724 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 MAATS1Q7Z4T9 603 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 CNTN4Q8IWV2 1026 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 LRRC25Q8N386 305 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 LIX1Q8N485 282 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 TTLQ8NG68 377 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 OR2L5Q8NG80 312 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 NEIL3Q8TAT5 605 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF721Q8TF20 911 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 NUDT8Q8WV74 236 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 KIAA1191Q96A73 305 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 JSRP1Q96MG2 331 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 RUNDC3BQ96NL0 473 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 SERINC2Q96SA4 455 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 REXO4Q9GZR2 422 aaKnown RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 SH2D2AQ9NP31 389 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ZFP64Q9NPA5 681 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ACKR4Q9NPB9 350 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 COPS7AQ9UBW8 275 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ZNF629Q9UEG4 869 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 FOXD3Q9UJU5 478 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 BOKQ9UMX3 212 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 VWA7Q9Y334 891 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 ATRQ13535 2644 aa8.31□□□□□ -1.08
HNRNPC-227ENST00000556897 KIAA1549Q9HCM3 1950 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 SYNDIG1LA6NDD5 238 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 NPEPPSL1A6NEC2 478 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 POM121CA8CG34 1229 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 CLCA1A8K7I4 914 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 AHRRA9YTQ3 701 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 CDC7O00311 574 aa8.3□□□□□ -1.08
HNRNPC-227ENST00000556897 H2AFYO75367 372 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms