RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TUBA3CQ13748 450 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 BMPR2Q13873 1038 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SERTAD2Q14140 314 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 TM4SF20Q53R12 229 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 LIPJQ5W064 366 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 CRYBG3Q68DQ2 2970 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SPINK14Q6IE38 97 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 METTL2BQ6P1Q9 378 aaKnown RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 MTFR2Q6P444 385 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ABHD17CQ6PCB6 329 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 TUBA3EQ6PEY2 450 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 MMGT1Q8N4V1 131 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 TMEM156Q8N614 296 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 TEX9Q8N6V9 391 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 CEP112Q8N8E3 955 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 B3GNT7Q8NFL0 401 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ELP5Q8TE02 316 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 RBM18Q96H35 190 aaKnown RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 F2RL3Q96RI0 385 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 VPS11Q9H270 941 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ACSS3Q9H6R3 686 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 LYRM4Q9HD34 91 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SNX15Q9NRS6 342 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ZDHHC18Q9NUE0 388 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SUCOQ9UBS9 1254 aaKnown RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 FBXW2Q9UKT8 454 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ZNF490Q9ULM2 529 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 TMCO1Q9UM00 188 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 DAPP1Q9UN19 280 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ESPL1Q14674 2120 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 A1L4Q6 167 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 UGDHO60701 494 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 CTNSO60931 367 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 DNAJB6O75190 326 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SMIM24O75264 130 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SLC25A12O75746 678 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ZFAND5O76080 213 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 TGFB1P01137 390 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 C1QAP02745 245 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 PIK3CBP42338 1070 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SSR2P43308 183 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 EFNA3P52797 238 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 LIM2P55344 173 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ALDH6A1Q02252 535 aaKnown RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SRSF11Q05519 484 aaKnown RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 DDX39BQ13838 428 aaKnown RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ELAVL1Q15717 326 aaKnown RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ADPRMQ3LIE5 342 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SLC25A25Q6KCM7 469 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 MAMDC2Q7Z304 686 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-222ENST00000556768 VN1R5Q7Z5H4 357 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 THNSL2Q86YJ6 484 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 IFT20Q8IY31 132 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 FAM47BQ8NA70 645 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 OR7G3Q8NG95 312 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 KCTD4Q8WVF5 259 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 RGMAQ96B86 450 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 VMP1Q96GC9 406 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 SCYL1Q96KG9 808 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 TAAR6Q96RI8 345 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ATOH8Q96SQ7 321 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ALOXE3Q9BYJ1 711 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 IPPKQ9H8X2 491 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 ADAP2Q9NPF8 381 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 NECTIN3Q9NQS3 549 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 COPS7AQ9UBW8 275 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 CELSR2Q9HCU4 2923 aa6.85□□□□□ -1.31
SCFD1-222ENST00000556768 DOPEY2Q9Y3R5 2298 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 TEX15Q9BXT5 2789 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 A0A087WUV0 522 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-222ENST00000556768 IGKV3D-11A0A0A0MRZ8 115 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 TRGV8A0A0C4DH27 118 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 TRBV11-1A0A0K0K1C0 115 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 WIPF3A6NGB9 483 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 POC1B-GALNT4F8VUJ3 575 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 KLRC4-KLRK1H3BQV0 150 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 TPD52L2O43399 206 aaKnown RBP6.84□□□□□ -1.31
SCFD1-222ENST00000556768 LDLRP01130 860 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 SP1P08047 785 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 STSP08842 583 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 FAM153BP0C7A2 387 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 ESRRAP11474 423 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-222ENST00000556768 COL6A2P12110 1019 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 HIST1H1TP22492 207 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-222ENST00000556768 CPN2P22792 545 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 CERS1P27544 350 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 PPP2R1BP30154 601 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 BUD31P41223 144 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-222ENST00000556768 HLCSP50747 726 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 RUNX2Q13950 521 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 C10orf62Q5T681 223 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-222ENST00000556768 DEPDC1Q5TB30 811 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 KHDRBS2Q5VWX1 349 aaKnown RBP6.84□□□□□ -1.31
SCFD1-222ENST00000556768 TTC19Q6DKK2 380 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-222ENST00000556768 OR4C11Q6IEV9 310 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 CYP20A1Q6UW02 462 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 HSDL2Q6YN16 418 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 GALNTL5Q7Z4T8 443 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 FJX1Q86VR8 437 aa6.84□□□□□ -1.31
SCFD1-222ENST00000556768 LAS2Q8IYD9 372 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms