RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 STX16-NPEPL1H3BU86 382 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 COPEO14579 308 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 STX16O14662 325 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 WISP2O76076 250 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 RASAL1O95294 804 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 RBP1P09455 135 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 COL6A2P12110 1019 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 GP1BBP13224 206 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 KRT4P19013 534 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 TRHRP34981 398 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 PIK3CGP48736 1102 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 RPS13P62277 151 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 PPP2R2AP63151 447 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 IGLV3-21P80748 117 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 SRSF11Q05519 484 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 SLC13A2Q13183 592 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 RASA2Q15283 850 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 ELAVL1Q15717 326 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 DEPDC1Q5TB30 811 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 FAM219BQ5XKK7 198 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 SPINK14Q6IE38 97 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 TRABD2AQ86V40 505 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 EXOC3L1Q86VI1 746 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 RPS19BP1Q86WX3 136 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 MYLK4Q86YV6 388 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 CNPY4Q8N129 248 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 ZCCHC7Q8N3Z6 543 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 ARFGAP2Q8N6H7 521 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 SRFBP1Q8NEF9 429 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 SUN3Q8TAQ9 357 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 MGARPQ8TDB4 240 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 MZB1Q8WU39 189 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 NCLNQ969V3 563 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 ANKRD9Q96BM1 317 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 TLCD1Q96CP7 247 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 PHF21BQ96EK2 531 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 FRMD6Q96NE9 622 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 MTERF1Q99551 399 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 UTP23Q9BRU9 249 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 NOL11Q9H8H0 719 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 IPPKQ9H8X2 491 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 ADAP2Q9NPF8 381 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 PNO1Q9NRX1 252 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 NKIRAS1Q9NYS0 192 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 RNF11Q9Y3C5 154 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 ANGPTL3Q9Y5C1 460 aa9.63□□□□□ -0.87
SHMT2-224ENST00000556737 TNPO3Q9Y5L0 923 aaKnown RBP9.63□□□□□ -0.87
SHMT2-224ENST00000556737 SPTBN1Q01082 2364 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 A0A0A6YYD5 115 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 MYOCOSA0A1B0GUC4 107 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 SYNDIG1LA6NDD5 238 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 TMEM200CA6NKL6 621 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 A8MT66 165 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 CLDN4O14493 209 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 FGF17O60258 216 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 NME2P1O60361 137 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 CTNSO60931 367 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 LDB3O75112 727 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 EEDO75530 441 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 PRKRAO75569 313 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 STSP08842 583 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 PYGBP11216 843 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 NME2P22392 152 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 BSGP35613 385 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 NEK2P51955 445 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 HNRNPH2P55795 449 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 TNFRSF17Q02223 184 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 ELOAQ14241 798 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 ZRSR2Q15696 482 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 CPSF6Q16630 551 aaKnown RBP eCLIP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 GGTA1PQ4G0N0 100 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 OR4C11Q6IEV9 310 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 MRM1Q6IN84 353 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 TIFABQ6ZNK6 161 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 CHSY3Q70JA7 882 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 RPS27LQ71UM5 84 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 ZNF321PQ8N8H1 164 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 CCDC63Q8NA47 563 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 ZNF483Q8TF39 744 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 PTPMT1Q8WUK0 201 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 DYDC1Q8WWB3 177 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 VMP1Q96GC9 406 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 SCYL1Q96KG9 808 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 PAIP2Q9BPZ3 127 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 MRPL57Q9BQC6 102 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 NTMT1Q9BV86 223 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 C1QTNF3Q9BXJ4 246 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 MRPL46Q9H2W6 279 aaKnown RBP9.62□□□□□ -0.87
SHMT2-224ENST00000556737 KLHL1Q9NR64 748 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 ADGRE2Q9UHX3 823 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 FBXW2Q9UKT8 454 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 TMCO1Q9UM00 188 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 PPT2Q9UMR5 302 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 SLC5A6Q9Y289 635 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 PCDHGA11Q9Y5H2 935 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 ICE1Q9Y2F5 2266 aa9.62□□□□□ -0.87
SHMT2-224ENST00000556737 UNC79Q9P2D8 2635 aa9.61□□□□□ -0.87
SHMT2-224ENST00000556737 FOXE1O00358 373 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-224ENST00000556737 CDK2AP1O14519 115 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms