RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 SMPDL3AQ92484 453 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 KCNJ9Q92806 393 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 RERGQ96A58 199 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ZUFSPQ96AP4 578 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ZBTB9Q96C00 473 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PYCR2Q96C36 320 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CCDC138Q96M89 665 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TSNARE1Q96NA8 513 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PRAP1Q96NZ9 151 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CYTH2Q99418 400 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 RBBP8Q99708 897 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CPNE1Q99829 537 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SELENOSQ9BQE4 189 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 CCDC77Q9BR77 488 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ZPBPQ9BS86 351 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 DDA1Q9BW61 102 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TWSG1Q9GZX9 223 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 RHOJQ9H4E5 214 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ACTR5Q9H9F9 607 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 FAM60AQ9NP50 221 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SLAMF7Q9NQ25 335 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ZDHHC18Q9NUE0 388 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SIDT1Q9NXL6 827 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 NINJ2Q9NZG7 142 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PDP2Q9P2J9 529 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 KLHL42Q9P2K6 505 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 TAC3Q9UHF0 121 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SLC45A2Q9UMX9 530 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 SNX7Q9UNH6 387 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PLCL2Q9UPR0 1127 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 PDE10AQ9Y233 779 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 MRPS18BQ9Y676 258 aaKnown RBP4.44□□□□□ -1.7
ATXN3-238ENST00000556288 AHCTF1Q8WYP5 2266 aa4.44□□□□□ -1.7
ATXN3-238ENST00000556288 ANKRD11Q6UB99 2663 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 NUP214P35658 2090 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 NINQ8N4C6 2090 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 A0A087WUV0 522 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 LOC105369274A0A096LPK9 316 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 LOC102723532A0A0G2JNH3 316 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 EXOC1LA0A1B0GW35 172 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FEZF1A0PJY2 475 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FAM159BA6NKW6 160 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 SUPT3HB4E1H0 165 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 GFYI3L273 518 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 TP73O15350 636 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 SLC16A5O15375 505 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 NKX2-8O15522 239 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 HCRTR1O43613 425 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 OR1F1O43749 312 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CCNT2O60583 730 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ERN1O75460 977 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 SUPT3HO75486 399 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CCNDBP1O95273 360 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ABHD16AO95870 558 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 GPANK1O95872 356 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 SLC16A8O95907 504 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ADH4P08319 380 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ANXA5P08758 320 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 HBQ1P09105 142 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ANKRD34CP0C6C1 535 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FGF5P12034 268 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FDXRP22570 491 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ZFP36P26651 326 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CD82P27701 267 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ATP5DP30049 168 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PEBP1P30086 187 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 UCNP55089 124 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 RAB10P61026 200 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 TIAL1Q01085 375 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 GRB7Q14451 532 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 RBBP5Q15291 538 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 TSNQ15631 228 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ZIC1Q15915 447 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CYP2A13Q16696 494 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PHKG1Q16816 387 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 DEFB109BQ30KR1 87 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 C18orf21Q32NC0 220 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 BEAN1Q3B7T3 259 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PTCHD3Q3KNS1 767 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FAM153CQ494X1 144 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 MINDY4Q4G0A6 757 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FBXO48Q5FWF7 155 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 LGSNQ5TDP6 509 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 MFSD4BQ5TF39 518 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ICE2Q659A1 982 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FCRL6Q6DN72 434 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CAPN13Q6MZZ7 669 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FBXO42Q6P3S6 717 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 TMEM207Q6UWW9 146 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 TAOK1Q7L7X3 1001 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CMC1Q7Z7K0 106 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 C17orf64Q86WR6 236 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 GPSM1Q86YR5 675 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PLD3Q8IV08 490 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CNTN4Q8IWV2 1026 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PRSS58Q8IYP2 241 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 OR4N4Q8N0Y3 316 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 TMEM132CQ8N3T6 1108 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 BMPERQ8N8U9 685 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms