RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 IKZF4Q9H2S9 585 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 MTHFD2LQ9H903 347 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 SMURF1Q9HCE7 757 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 PPP4R1LQ9P1A2 415 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 ASB4Q9Y574 426 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 UNC119BA6NIH7 251 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 A6NIZ1 184 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 M0QZQ0 153 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 OR2T1O43869 369 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CDC40O60508 579 aaKnown RBP eCLIP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RNGTTO60942 597 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 DIRAS3O95661 229 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RAP1BP61224 184 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RAP1AP62834 184 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CLDN10P78369 228 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 PLCXD2Q0VAA5 305 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RUNX3Q13761 415 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 EFR3AQ14156 821 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 ZNF267Q14586 743 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 GANABQ14697 944 aaKnown RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 MLC1Q15049 377 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 HSF5Q4G112 596 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 PIGGQ5H8A4 983 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 LDLRAD1Q5T700 205 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 TMEM198Q66K66 360 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RNF19BQ6ZMZ0 732 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 Q6ZVL8 140 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 S100A7AQ86SG5 101 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 PRSS58Q8IYP2 241 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 GRHL3Q8TE85 626 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 CYB5D2Q8WUJ1 264 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 THEM6Q8WUY1 208 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 L3HYPDHQ96EM0 354 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 DHRS1Q96LJ7 313 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 EBF4Q9BQW3 602 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 RDH14Q9HBH5 336 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 C12orf4Q9NQ89 552 aa10.3□□□□□ -0.76
ACTN1-216ENST00000556083 WRAP73Q9P2S5 460 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-216ENST00000556083 KIR2DS5A0A0G2JLQ3 304 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 A0A0G2JNG1 304 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 A0A1W2PPW3 197 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 WASH4PA8MWX3 477 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 KIR2DS3K7RE56 304 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 TLX2O43763 284 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 LEFTY1O75610 366 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 C6orf47O95873 294 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 IQCF3P0C7M6 154 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 PNMTP11086 282 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 XRCC1P18887 633 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 CD9P21926 228 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 KDELR2P33947 212 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 EIF2S3P41091 472 aaKnown RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 MYOM1P52179 1685 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 MAZP56270 477 aaKnown RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 MRPS10P82664 201 aaKnown RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 MLLT1Q03111 559 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 MXD1Q05195 221 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 KIR2DS5Q14953 304 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 FAM182AQ5T1J6 154 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 ADAMTS16Q8TE57 1224 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 FCAMRQ8WWV6 532 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 MR1Q95460 341 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 SCRN2Q96FV2 425 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 PTCHD1Q96NR3 888 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 HBEGFQ99075 208 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 SACM1LQ9NTJ5 587 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 SOX1O00570 391 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 RNF13O43567 381 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 PRAMEF2O60811 474 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 B4GALT2O60909 372 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 RBBP9O75884 186 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 KLF8O95600 359 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 H2BFMP0C1H6 154 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 PSKH1P11801 424 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 FDXRP22570 491 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 KLF1Q13351 362 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 PCBP2Q15366 365 aaKnown RBP eCLIP10.29□□□□□ -0.763e-7■■■■□ 22
ACTN1-216ENST00000556083 NLGN2Q8NFZ4 835 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 OR2L2Q8NH16 312 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 OR51I1Q9H343 314 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 ACOT13Q9NPJ3 140 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 NANSQ9NR45 359 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 NCDNQ9UBB6 729 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 GPR34Q9UPC5 381 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 KCNK6Q9Y257 313 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 NOP16Q9Y3C1 178 aaKnown RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 OR51F1A6NGY5 319 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 HSD17B1P14061 328 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 CDKN1CP49918 316 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-216ENST00000556083 TPTEP56180 551 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 OR4D2P58180 307 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 ACTBP60709 375 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 PRPS1P60891 318 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 UFM1P61960 85 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 ACTG1P63261 375 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 LMAN2Q12907 356 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 TUBB3Q13509 450 aa10.29□□□□□ -0.76
ACTN1-216ENST00000556083 GNMTQ14749 295 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms