RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 MRASO14807 208 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 PROM1O43490 865 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 OR10H2O60403 315 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 ERAL1O75616 437 aaKnown RBP10.57□□□□□ -0.72
SHMT2-220ENST00000555634 STK17BO94768 372 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 SLITRK5O94991 958 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 TNFSF15O95150 251 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 KCNH1O95259 989 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 NTRK1P04629 796 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 FHP07954 510 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 CYC1P08574 325 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 COX4I1P13073 169 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 CSNK2A2P19784 350 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-220ENST00000555634 TACR1P25103 407 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 MPIP34949 423 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 GPC1P35052 558 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 OR1D4P47884 311 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 NUDT2P50583 147 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 HSD17B7P56937 341 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 SERTAD2Q14140 314 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 MAP7Q14244 749 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 PUM1Q14671 1186 aaKnown RBP eCLIP10.57□□□□□ -0.72
SHMT2-220ENST00000555634 MRM1Q6IN84 353 aaKnown RBP10.57□□□□□ -0.72
SHMT2-220ENST00000555634 SLC48A1Q6P1K1 146 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 BLOC1S3Q6QNY0 202 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 C6orf15Q6UXA7 325 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-220ENST00000555634 GK5Q6ZS86 529 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 TMPRSS7Q7RTY8 843 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 CAMKMTQ7Z624 323 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 ARPINQ7Z6K5 226 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 TICAM1Q8IUC6 712 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 ARHGEF39Q8N4T4 335 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 KRTCAP2Q8N6L1 136 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 FITM2Q8N6M3 262 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 OR4K14Q8NGD5 310 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 OR8J2Q8NGG1 315 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 OR5T3Q8NGG3 340 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 OR9I1Q8NGQ6 314 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 METTL21AQ8WXB1 218 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 KIAA1143Q96AT1 154 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-220ENST00000555634 MIEF2Q96C03 454 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 TM4SF18Q96CE8 201 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 GBP5Q96PP8 586 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 MAPKAP1Q9BPZ7 522 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 CCDC106Q9BWC9 280 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 RBCK1Q9BYM8 510 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 AICDAQ9GZX7 198 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 WDR54Q9H977 334 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 EFCAB1Q9HAE3 211 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 APMAPQ9HDC9 416 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 PRTFDC1Q9NRG1 225 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 ATP6V1HQ9UI12 483 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 ASB4Q9Y574 426 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 A0A1W2PP18 115 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 A0A1W2PR48 441 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 MEN1O00255 615 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 RNASET2O00584 256 aaKnown RBP10.56□□□□□ -0.72
SHMT2-220ENST00000555634 PCDH17O14917 1159 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 FOXS1O43638 330 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 TBX19O60806 448 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 NPPAP01160 153 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 ALBP02768 609 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 SOAT1P35610 550 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 PDE7AQ13946 482 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 NFYCQ13952 458 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 ZSCAN26Q16670 478 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 SPDYE7PQ495Y7 208 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 SPANXN4Q5MJ08 99 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 BHLHB9Q6PI77 547 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 C16orf89Q6UX73 402 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 ARHGAP24Q8N264 748 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 LRRC25Q8N386 305 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-220ENST00000555634 OR7A2PQ8NGA2 310 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 OR4A15Q8NGL6 344 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 ROPN1LQ96C74 230 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 NSL1Q96IY1 281 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 EGLN2Q96KS0 407 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 PANX1Q96RD7 426 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 FAM117AQ9C073 453 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 SLC35C2Q9NQQ7 365 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 C19orf25Q9UFG5 118 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-220ENST00000555634 VPS4AQ9UN37 437 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 CORO2BQ9UQ03 480 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 ATG4BQ9Y4P1 393 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 B3GALT1Q9Y5Z6 326 aa10.56□□□□□ -0.72
SHMT2-220ENST00000555634 DNAH14Q0VDD8 3507 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 A0A1W2PRB8 838 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 FAM149AA5PLN7 773 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 GLOD5A6NK44 160 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 CAPN14A8MX76 684 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 RFXANKO14593 260 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 ANKRD28O15084 1053 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 B4GALT2O60909 372 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 CDC123O75794 336 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 UBOX5O94941 541 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 TIAF1O95411 115 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 B3GALT4O96024 378 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 HEXBP07686 556 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 CTSBP07858 339 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 KRT16P08779 473 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms