RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 CERS1P27544 350 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 RBMS1P29558 406 aaKnown RBP16.68■□□□□ 0.26
PSEN1-212ENST00000555254 MC1RQ01726 317 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 PDE7AQ13946 482 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 CAPRIN1Q14444 709 aaKnown RBP16.68■□□□□ 0.26
PSEN1-212ENST00000555254 DEFB110Q30KQ9 67 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 SPATS1Q496A3 300 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 DEFB134Q4QY38 66 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 GARNL3Q5VVW2 1013 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 ANKRD26P1Q6NSI1 321 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 TMEM214Q6NUQ4 689 aaKnown RBP16.68■□□□□ 0.26
PSEN1-212ENST00000555254 ZNF793Q6ZN11 406 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 TICAM1Q8IUC6 712 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 EFCAB3Q8N7B9 438 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 SMIM10Q96HG1 83 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 CGREF1Q99674 301 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 SYNPO2LQ9H987 977 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 GIMAP4Q9NUV9 329 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 MS4A12Q9NXJ0 267 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 AKAP7Q9P0M2 348 aaPredicted RBP16.68■□□□□ 0.26
PSEN1-212ENST00000555254 SEMA5BQ9P283 1151 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 BTNL2Q9UIR0 455 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 LHX6Q9UPM6 363 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 MAN2B2Q9Y2E5 1009 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 LOXL2Q9Y4K0 774 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 HEATR5BQ9P2D3 2071 aa16.68■□□□□ 0.26
PSEN1-212ENST00000555254 C1orf226A1L170 272 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 TMEM8BA6NDV4 472 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 RNASET2O00584 256 aaKnown RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 PLD2O14939 933 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 JMJD7P0C870 316 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 ME2P23368 584 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 BUD31P41223 144 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 SLC7A2P52569 658 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 HNRNPFP52597 415 aaKnown RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 PHC1P78364 1004 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 GRM7Q14831 915 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 C16orf72Q14CZ0 275 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 PRTGQ2VWP7 1150 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 NDUFAF5Q5TEU4 345 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 MRM1Q6IN84 353 aaKnown RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 FAM47BQ8NA70 645 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 DNAJB14Q8TBM8 379 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 KLHL6Q8WZ60 621 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 UTP4Q969X6 686 aaKnown RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 LIN37Q96GY3 246 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 ZNF764Q96H86 408 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 CLPTM1LQ96KA5 538 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 PANX1Q96RD7 426 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 CMKLR1Q99788 373 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 GPATCH1Q9BRR8 931 aaKnown RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 NPLQ9BXD5 320 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-212ENST00000555254 LYRM4Q9HD34 91 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 STARD5Q9NSY2 213 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 EHD3Q9NZN3 535 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 PISDQ9UG56 409 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 SERTAD3Q9UJW9 196 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 ASB4Q9Y574 426 aa16.67■□□□□ 0.26
PSEN1-212ENST00000555254 A0A1W2PRB8 838 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 HYKKA2RU49 373 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 PDE5AO76074 875 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 CPN2P22792 545 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 CSTF2P33240 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
PSEN1-212ENST00000555254 EMP3P54852 163 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 RP1P56715 2156 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 FAM214AQ32MH5 1076 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 C1orf146Q5VVC0 180 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 C8orf82Q6P1X6 216 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-212ENST00000555254 PGM2L1Q6PCE3 622 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 DLEU7Q6UYE1 221 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 ZNF621Q6ZSS3 439 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 NET1Q7Z628 596 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-212ENST00000555254 ANKRD46Q86W74 232 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 C10orf67Q8IYJ2 551 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 GPR135Q8IZ08 494 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 D2HGDHQ8N465 521 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 AMER3Q8N944 861 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 FAM13CQ8NE31 585 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 OR4A15Q8NGL6 344 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 SLC41A2Q96JW4 573 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 CCDC115Q96NT0 180 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 ZNF768Q9H5H4 540 aaKnown RBP16.66■□□□□ 0.26
PSEN1-212ENST00000555254 TMEM181Q9P2C4 612 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 VPS4AQ9UN37 437 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 EXO1Q9UQ84 846 aaKnown RBP16.66■□□□□ 0.26
PSEN1-212ENST00000555254 PCDHA9Q9Y5H5 950 aa16.66■□□□□ 0.26
PSEN1-212ENST00000555254 ADAMTS20P59510 1910 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 EVPLLA8MZ36 301 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 C4orf51C9J302 202 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 TAF4O00268 1085 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 PDPK1O15530 556 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 GALR3O60755 368 aaPredicted RBP16.65■□□□□ 0.26
PSEN1-212ENST00000555254 DNAJA2O60884 412 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 OR2B3O76000 313 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 CAPNS1P04632 268 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 NR2F6P10588 404 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 NELFEP18615 380 aaKnown RBP16.65■□□□□ 0.26
PSEN1-212ENST00000555254 ITIH1P19827 911 aa16.65■□□□□ 0.26
PSEN1-212ENST00000555254 PPIBP23284 216 aaKnown RBP16.65■□□□□ 0.26
PSEN1-212ENST00000555254 NTSP30990 170 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms