RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CCPG1Q9ULG6 757 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 ODF2LQ9ULJ1 636 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 RPH3AQ9Y2J0 694 aaPredicted RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 TCF20Q9UGU0 1960 aaKnown RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 IGHV3-20A0A0C4DH32 117 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 RNF103-CHMP3A0A140T963 221 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 BICDL2A1A5D9 508 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 A8MU76 341 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 G3V2L1 256 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 KIAA0513O60268 411 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 CSDE1O75534 798 aaKnown RBP4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 ALPPP05187 535 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 CCDC192P0DO97 292 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 ALPPL2P10696 532 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 UGT1A4P22310 534 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 GPX3P22352 226 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 LUMP51884 338 aaPredicted RBP4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 SRP54P61011 504 aaKnown RBP4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 SSTP61278 116 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 IRX1P78414 480 aaPredicted RBP4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 RBBP4Q09028 425 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 NECTIN1Q15223 517 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 UPP1Q16831 310 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 PARP10Q53GL7 1025 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 CCDC92Q53HC0 331 aaPredicted RBP4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZC2HC1BQ5TFG8 222 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 PRAMEF7Q5VXH5 474 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 NKAIN2Q5VXU1 208 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 FAAP20Q6NZ36 180 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 OR4N5Q8IXE1 308 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 CCNYQ8ND76 341 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 TMEM185AQ8NFB2 350 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 OR52B6Q8NGF0 335 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 OR4L1Q8NH43 312 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 SPPL2AQ8TCT8 520 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 TCP11Q8WWU5 503 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 RPGRIP1Q96KN7 1286 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 LINC00479Q96M42 142 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 GPR137Q96N19 417 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 THEGQ9P2T0 379 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 KCNN3Q9UGI6 736 aa4.55□□□□□ -1.68
CKS1BP1-201ENST00000555221 ARHGAP42A6NI28 874 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 SHISA7A6NL88 538 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 TMCO5BA8MYB1 307 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 NME2P1O60361 137 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 TXNDC12O95881 172 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 SLC4A1P02730 911 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 GAP43P17677 238 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZFP36L2P47974 494 aaKnown RBP4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 HERV-K104P63124 156 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 CDKL1Q00532 357 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 CALCOCO2Q13137 446 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 MLF2Q15773 248 aaPredicted RBP4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 PKN2Q16513 984 aaKnown RBP4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 CCDC40Q4G0X9 1142 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 CEP85LQ5SZL2 805 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 DDI2Q5TDH0 399 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 HIST2H2AA3Q6FI13 130 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 RTL6Q6ICC9 239 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 NEK5Q6P3R8 708 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZNF730Q6ZMV8 503 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZSCAN30Q86W11 494 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 HDDC3Q8N4P3 179 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 PCED1BQ96HM7 432 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 CXorf58Q96LI9 332 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 RAB40CQ96S21 281 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 FUNDC2Q9BWH2 189 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 SLC26A1Q9H2B4 701 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 DPEP3Q9H4B8 488 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 TECRQ9NZ01 308 aaKnown RBP4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 VPS54Q9P1Q0 977 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 RNF215Q9Y6U7 377 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 CECR2Q9BXF3 1484 aa4.54□□□□□ -1.68
CKS1BP1-201ENST00000555221 UNC13AQ9UPW8 1703 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 IGHV4-30-2A0A087WSY4 118 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 MEX3AA1L020 520 aaKnown RBP4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 CCDC69A6NI79 296 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 YJEFN3A6XGL0 299 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 OR6A2O95222 327 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 CALCAP01258 141 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 ADORA3P0DMS8 318 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 PCP11498 1178 aaKnown RBP4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 TNFRSF4P43489 277 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 PITPNBP48739 271 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 GAMTQ14353 236 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 TRADDQ15628 312 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 WSCD2Q2TBF2 565 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 MS4A18Q3C1V0 323 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 GDPGP1Q6ZNW5 385 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 ADAMTSL2Q86TH1 951 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 TBC1D10CQ8IV04 446 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 GVQW1Q8N7I0 195 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 GTF3AQ92664 365 aaKnown RBP4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 TMEM186Q96B77 213 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 RAB39BQ96DA2 213 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 AGAP3Q96P47 875 aa4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 ALKBH3Q96Q83 286 aaPredicted RBP4.53□□□□□ -1.68
CKS1BP1-201ENST00000555221 SYT11Q9BT88 431 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms