RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 RNF145Q96MT1 663 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 AMDHD1Q96NU7 426 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 DUSP15Q9H1R2 295 aaPredicted RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 VCXQ9H320 206 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 GLIPR2Q9H4G4 154 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 VCX3AQ9NNX9 186 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 A4GALTQ9NPC4 353 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ITGB1BP2Q9UKP3 347 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 A0A1W2PS29 197 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PRAMEF27A3QJZ7 478 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 TRIM64A6NGJ6 449 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ERI3O43414 337 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 PRAMEF10O60809 474 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 DNAJB6O75190 326 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 GIMD1P0DJR0 217 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ARAFP10398 606 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 JUNDP17535 347 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 BLKP51451 505 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PLA2G16P53816 162 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 SH3BGRP55822 239 aaPredicted RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 RBBP4Q09028 425 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 SLAMF1Q13291 335 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 NRF1Q16656 503 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 CRB2Q5IJ48 1285 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 OR52E8Q6IFG1 317 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 TMEM214Q6NUQ4 689 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 FIGLAQ6QHK4 219 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 ZNF438Q7Z4V0 828 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 GALNT10Q86SR1 603 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 SHISA5Q8N114 240 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 DEFB119Q8N690 84 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 NCSTNQ92542 709 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 SNX19Q92543 992 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 CNRIP1Q96F85 164 aaPredicted RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 C9orf16Q9BUW7 83 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 FAM192AQ9GZU8 254 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 OCEL1Q9H607 264 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 IL1RAPQ9NPH3 570 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 PRMT8Q9NR22 394 aaPredicted RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 USE1Q9NZ43 259 aa8.43□□□□□ -1.06
TDP1-210ENST00000554976 SAMD4AQ9UPU9 718 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 MRPS2Q9Y399 296 aaKnown RBP8.43□□□□□ -1.06
TDP1-210ENST00000554976 A0A0G2JN53 185 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 SAC3D1A6NKF1 404 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 PGRMC2O15173 223 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 GSTA4O15217 222 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 NDUFS2O75306 463 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 VIPP01282 170 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 ALPLP05186 524 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 ZNF888P0CJ79 500 aaPredicted RBP8.42□□□□□ -1.06
TDP1-210ENST00000554976 ADARB1P78563 741 aaKnown RBP8.42□□□□□ -1.06
TDP1-210ENST00000554976 PPP2R2BQ00005 443 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 MLLT1Q03111 559 aaPredicted RBP8.42□□□□□ -1.06
TDP1-210ENST00000554976 C1orf61Q13536 156 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 PDK3Q15120 406 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 SHBQ15464 509 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 C18orf63Q68DL7 685 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 ADCK2Q7Z695 626 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 TAF8Q7Z7C8 310 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 RNF130Q86XS8 419 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 TMBIM1Q969X1 311 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 ZNF285Q96NJ3 590 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 MAPKAP1Q9BPZ7 522 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 OSBPL11Q9BXB4 747 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 NEUROD4Q9HD90 331 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 MIEF1Q9NQG6 463 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 LYARQ9NX58 379 aaKnown RBP8.42□□□□□ -1.06
TDP1-210ENST00000554976 NTMQ9P121 344 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 DNAJB9Q9UBS3 223 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 PAIP2BQ9ULR5 123 aaKnown RBP8.42□□□□□ -1.06
TDP1-210ENST00000554976 ABCG2Q9UNQ0 655 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 V9GYQ6 96 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 MAGEA13PA6NCF6 341 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 LILRA5A6NI73 299 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 ZW10O43264 779 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 TPST1O60507 370 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 HPRP00739 348 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 LDLRP01130 860 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 SSR2P43308 183 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 STXBP1P61764 594 aaKnown RBP8.42□□□□□ -1.06
TDP1-210ENST00000554976 BNC1Q01954 994 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 HHEXQ03014 270 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 CBX3Q13185 183 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.42□□□□□ -1.06
TDP1-210ENST00000554976 TJAP1Q5JTD0 557 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 TMEM64Q6YI46 380 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 GALNT4Q8N4A0 578 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 HORMAD2Q8N7B1 307 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 OR5AK3PQ8NH89 298 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 CD320Q9NPF0 282 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 FBXL21Q9UKT6 434 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 PADI2Q9Y2J8 665 aa8.42□□□□□ -1.06
TDP1-210ENST00000554976 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 H3BMH7 237 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 HMGN4O00479 90 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 EI24O14681 340 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 CTSBP07858 339 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 TFPTP0C1Z6 253 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 MAOBP27338 520 aa8.41□□□□□ -1.06
TDP1-210ENST00000554976 MAN2A2P49641 1150 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms