RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 ZNHIT2Q9UHR6 403 aa10.6□□□□□ -0.71
SHMT2-216ENST00000554975 TSR3Q9UJK0 312 aaKnown RBP10.6□□□□□ -0.71
SHMT2-216ENST00000554975 KCND3Q9UK17 655 aa10.6□□□□□ -0.71
SHMT2-216ENST00000554975 PDE10AQ9Y233 779 aa10.6□□□□□ -0.71
SHMT2-216ENST00000554975 ZGRF1Q86YA3 2104 aa10.6□□□□□ -0.71
SHMT2-216ENST00000554975 NAV3Q8IVL0 2385 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 A0A096LPI6 279 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 FADS2P1A8MWK0 482 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 H0YAE9 185 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 GFYI3L273 518 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 FFAR3O14843 346 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 GPR42O15529 346 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 H6PDO95479 791 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 SOD1P00441 154 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 PGRP06401 933 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 ZNF23P17027 643 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 MYF6P23409 242 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 IL12AP29459 219 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 CCR7P32248 378 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 DLSTP36957 453 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 ACTR1BP42025 376 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 ASMTP46597 345 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 PPM1FP49593 454 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 C21orf58P58505 322 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 ACTR1AP61163 376 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 ESRRGP62508 458 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 MYBPC1Q00872 1141 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 CTBSQ01459 385 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 HSPA14Q0VDF9 509 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 INPP5JQ15735 1006 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 NRF1Q16656 503 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 FAM174BQ3ZCQ3 159 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 LRIF1Q5T3J3 769 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 HENMT1Q5T8I9 393 aaKnown RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 FRG2Q64ET8 278 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 GLYATQ6IB77 296 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 SLC2A7Q6PXP3 512 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 AMIGO2Q86SJ2 522 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 NLRP8Q86W28 1048 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 IFNEQ86WN2 208 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 EID3Q8N140 333 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 SVOPLQ8N434 492 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 Q8NA96 180 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 FBXO15Q8NCQ5 510 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 ZFP28Q8NHY6 868 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 PNPT1Q8TCS8 783 aaKnown RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 NAT14Q8WUY8 206 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 FCRL1Q96LA6 429 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 FRG2BQ96QU4 278 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 SEMA6AQ9H2E6 1030 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 ACTL8Q9H568 366 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 CLK4Q9HAZ1 481 aaKnown RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 FBXO8Q9NRD0 319 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 PAPOLBQ9NRJ5 636 aaKnown RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 TRNAU1APQ9NX07 287 aaKnown RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 CORO2BQ9UQ03 480 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 POLHQ9Y253 713 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 RUVBL1Q9Y265 456 aaKnown RBP10.59□□□□□ -0.71
SHMT2-216ENST00000554975 SLC17A4Q9Y2C5 497 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 SVILO95425 2214 aa10.59□□□□□ -0.71
SHMT2-216ENST00000554975 TRBV23OR9-2A0A075B6M9 112 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 KCNE1BA0A087WTH5 132 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 A0A087WXM4 84 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 ELOVL7A1L3X0 281 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 CDC14CA4D256 554 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 SAC3D1A6NKF1 404 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 C9JVG2 144 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 CLGNO14967 610 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 PSIP1O75475 530 aaKnown RBP10.58□□□□□ -0.72
SHMT2-216ENST00000554975 SLCO2B1O94956 709 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 ALBP02768 609 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 PRPS1L1P21108 318 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 RPL3P39023 403 aaKnown RBP10.58□□□□□ -0.72
SHMT2-216ENST00000554975 TRPC1P48995 793 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 PHEXP78562 749 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 IRF8Q02556 426 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 SRSF11Q05519 484 aaKnown RBP10.58□□□□□ -0.72
SHMT2-216ENST00000554975 PCDH1Q08174 1060 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 GTF2H3Q13889 308 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 KIAA0040Q15053 153 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 RFX4Q33E94 735 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 RFTN2Q52LD8 501 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-216ENST00000554975 ZNF648Q5T619 568 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-216ENST00000554975 CPZQ66K79 652 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 DLEU7Q6UYE1 221 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 CHST15Q7LFX5 561 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-216ENST00000554975 RASGRP3Q8IV61 690 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 SPNS2Q8IVW8 549 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 CBR4Q8N4T8 237 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 DHRSXQ8N5I4 330 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 TFAP2CQ92754 450 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 GLYATL1Q969I3 302 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 CXorf40BQ96DE9 158 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 DGCR14Q96DF8 476 aaKnown RBP10.58□□□□□ -0.72
SHMT2-216ENST00000554975 COX14Q96I36 57 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 TEX37Q96LM6 180 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 CCDC138Q96M89 665 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 PPM1MQ96MI6 270 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 OR52E6Q96RD3 313 aa10.58□□□□□ -0.72
SHMT2-216ENST00000554975 PRPF18Q99633 342 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms