RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ARMC3Q5W041 872 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 ZNF549Q6P9A3 640 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 AGTRAPQ6RW13 159 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 CYHR1Q6ZMK1 362 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 MEX3BQ6ZN04 569 aaKnown RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 CAND1Q86VP6 1230 aaKnown RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 IGDCC3Q8IVU1 814 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 ZNF295-AS1Q8N0V1 137 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 LGI4Q8N135 537 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 CPSF7Q8N684 471 aaKnown RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 MFSD9Q8NBP5 474 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 GABPB2Q8TAK5 448 aaPredicted RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 ADAMTS18Q8TE60 1221 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 SREK1Q8WXA9 508 aaKnown RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 MCUR1Q96AQ8 359 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 TBC1D20Q96BZ9 403 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 PTCD3Q96EY7 689 aaKnown RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 THOC1Q96FV9 657 aaKnown RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 PTCHD1Q96NR3 888 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 NDNQ99608 321 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 NPAS2Q99743 824 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 HAUS8Q9BT25 410 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 FAM167BQ9BTA0 163 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 C1orf21Q9H246 121 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 PARVBQ9HBI1 364 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 IARS2Q9NSE4 1012 aaKnown RBP8.28□□□□□ -1.08
TDP1-208ENST00000553989 MOCS1Q9NZB8 636 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 SLC17A7Q9P2U7 560 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 ADAMTS6Q9UKP5 1117 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 FBXO5Q9UKT4 447 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 TRIM33Q9UPN9 1127 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 PDE10AQ9Y233 779 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 ZNF835Q9Y2P0 537 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 MED16Q9Y2X0 877 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 SLC22A7Q9Y694 548 aa8.28□□□□□ -1.08
TDP1-208ENST00000553989 SCN2AQ99250 2005 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 F8P00451 2351 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 E9PLN8 166 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 EIF3FO00303 357 aaPredicted RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 CHST10O43529 356 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 LCMT2O60294 686 aaKnown RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 NME2P1O60361 137 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 CIB2O75838 187 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 BPGMP07738 259 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 RPSAP08865 295 aaKnown RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 ZNF888P0CJ79 500 aaPredicted RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 ACADSP16219 412 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 ALOX12P18054 663 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 CAPN3P20807 821 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 ATP6V1C1P21283 382 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 NME2P22392 152 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 PTGER1P34995 402 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 VHLP40337 213 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 RFC3P40938 356 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 HNF4AP41235 474 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 MEOX1P50221 254 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 CCR8P51685 355 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 KRTAP10-9P60411 292 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 SLC34A1Q06495 639 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 TAF11Q15544 211 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 OCLNQ16625 522 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 GRTP1Q5TC63 336 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 ZNF468Q5VIY5 522 aaPredicted RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 STEAP4Q687X5 459 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 NIPAL1Q6NVV3 410 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 LCTLQ6UWM7 567 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 ABHD13Q7L211 337 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 CD163Q86VB7 1156 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 SIAH3Q8IW03 269 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 WDR75Q8IWA0 830 aaKnown RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.27□□□□□ -1.09
TDP1-208ENST00000553989 ZNF740Q8NDX6 193 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 PLPP5Q8NEB5 264 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 PHF10Q8WUB8 498 aaKnown RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 EEF1AKMT1Q8WVE0 214 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 STMN2Q93045 179 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 UTP4Q969X6 686 aaKnown RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 PYCR2Q96C36 320 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 TM4SF19Q96DZ7 209 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 C14orf79Q96F83 325 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 LINGO1Q96FE5 620 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 CFAP36Q96G28 342 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 FAM111AQ96PZ2 611 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 VKORC1Q9BQB6 163 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 AARSD1Q9BTE6 412 aaKnown RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 TMEM120AQ9BXJ8 343 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 TRIM54Q9BYV2 358 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 DEFB126Q9BYW3 111 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 RHBGQ9H310 441 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 ARL15Q9NXU5 204 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 TAS2R13Q9NYV9 303 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 DCTN4Q9UJW0 460 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 CORO1CQ9ULV4 474 aaPredicted RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 KLF13Q9Y2Y9 288 aaPredicted RBP8.27□□□□□ -1.09
TDP1-208ENST00000553989 APCP25054 2843 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 C2CD3Q4AC94 2353 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 SCN3AQ9NY46 2000 aa8.27□□□□□ -1.09
TDP1-208ENST00000553989 A0A1B0GTH9 108 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 ZCWPW2A0A1B0GU75 182 aa8.26□□□□□ -1.09
TDP1-208ENST00000553989 URADA6NGE7 173 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms