RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MNS1Q8NEH6 495 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 SLC2A12Q8TD20 617 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 CMTM7Q96FZ5 175 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 VMP1Q96GC9 406 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 LYRM4Q9HD34 91 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 TMEM216Q9P0N5 145 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 ZNF225Q9UK10 706 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 PPIEQ9UNP9 301 aaKnown RBP16.94■□□□□ 0.3
SHMT2-206ENST00000553529 EML6Q6ZMW3 1958 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 POLEQ07864 2286 aa16.94■□□□□ 0.3
SHMT2-206ENST00000553529 A0A087WUV0 522 aaPredicted RBP16.93■□□□□ 0.3
SHMT2-206ENST00000553529 A0A088AWK7 358 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 A0A0A6YYD5 115 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 EXOC1LA0A1B0GW35 172 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 A0A1W2PR48 441 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 A8MT66 165 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 RIPK2O43353 540 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 CRYABP02511 175 aaKnown RBP16.93■□□□□ 0.3
SHMT2-206ENST00000553529 ZNF10P21506 573 aaPredicted RBP16.93■□□□□ 0.3
SHMT2-206ENST00000553529 GRNP28799 593 aaKnown RBP16.93■□□□□ 0.3
SHMT2-206ENST00000553529 SOX3P41225 446 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 MEOX1P50221 254 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 HLCSP50747 726 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 ALDH6A1Q02252 535 aaKnown RBP16.93■□□□□ 0.3
SHMT2-206ENST00000553529 FOLH1Q04609 750 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 ELAVL1Q15717 326 aaKnown RBP16.93■□□□□ 0.3
SHMT2-206ENST00000553529 ZNF750Q32MQ0 723 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 TMEM35AQ53FP2 167 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 LIPJQ5W064 366 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 LETMD1Q6P1Q0 360 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 KLC3Q6P597 504 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 ARMC10Q8N2F6 343 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 L3MBTL4Q8NA19 623 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 KIF18AQ8NI77 898 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 ZNF721Q8TF20 911 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 CCDC120Q96HB5 630 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 GPR137Q96N19 417 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 TXLNGYQ9BZA5 131 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 TEX10Q9NXF1 929 aaPredicted RBP16.93■□□□□ 0.3
SHMT2-206ENST00000553529 VTI1BQ9UEU0 232 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 ASB4Q9Y574 426 aa16.93■□□□□ 0.3
SHMT2-206ENST00000553529 H0YIV9 168 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 AIFM1O95831 613 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 SHBGP04278 402 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 RPS17P08708 135 aaKnown RBP16.92■□□□□ 0.3
SHMT2-206ENST00000553529 TNNI3P19429 210 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 TRHRP34981 398 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-206ENST00000553529 HK2P52789 917 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 TNFRSF17Q02223 184 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 TGM3Q08188 693 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 GLE1Q53GS7 698 aaKnown RBP16.92■□□□□ 0.3
SHMT2-206ENST00000553529 TEX35Q5T0J7 233 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 MRM1Q6IN84 353 aaKnown RBP16.92■□□□□ 0.3
SHMT2-206ENST00000553529 IL20RBQ6UXL0 311 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 CHSY3Q70JA7 882 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 C9orf40Q8IXQ3 194 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 LGI4Q8N135 537 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 CYP4Z2PQ8N1L4 340 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 OR4F6Q8NGB9 312 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 UBE2E3Q969T4 207 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 RGMAQ96B86 450 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 RASL10BQ96S79 203 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 MRPL1Q9BYD6 325 aaKnown RBP16.92■□□□□ 0.3
SHMT2-206ENST00000553529 TRIM45Q9H8W5 580 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-206ENST00000553529 MRPS33Q9Y291 106 aaKnown RBP16.92■□□□□ 0.3
SHMT2-206ENST00000553529 CLCA3PQ9Y6N3 262 aa16.92■□□□□ 0.3
SHMT2-206ENST00000553529 CCL21O00585 134 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 PGRMC2O15173 223 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 SLC19A2O60779 497 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 LRATO95237 230 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 CLDN9O95484 217 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 CLPSP04118 112 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 PIK3CBP42338 1070 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 SERPINB9P50453 376 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 CCNG1P51959 295 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 ADORA2A-AS1P86434 159 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 FAM180BQ6P0A1 224 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 GPR180Q86V85 440 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 TMEM156Q8N614 296 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 TMEM178AQ8NBL3 297 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 DNAJB8Q8NHS0 232 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 ADAMTS18Q8TE60 1221 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 ZNF483Q8TF39 744 aaPredicted RBP16.91■□□□□ 0.3
SHMT2-206ENST00000553529 ATP6V1E2Q96A05 226 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 C12orf65Q9H3J6 166 aaKnown RBP16.91■□□□□ 0.3
SHMT2-206ENST00000553529 RPF2Q9H7B2 306 aaKnown RBP16.91■□□□□ 0.3
SHMT2-206ENST00000553529 TBK1Q9UHD2 729 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 ZNF180Q9UJW8 692 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 IKBKGQ9Y6K9 419 aa16.91■□□□□ 0.3
SHMT2-206ENST00000553529 A0A1W2PPM1 405 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 FCHO1O14526 889 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 PROM1O43490 865 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 HS6ST1O60243 411 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 KRT38O76015 456 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 ZFAND5O76080 213 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 PDE9AO76083 593 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 CHN1P15882 459 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 CA7P43166 264 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 SSR4P51571 173 aa16.9■□□□□ 0.3
SHMT2-206ENST00000553529 RNF4P78317 190 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms