RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TMEM45AQ9NWC5 275 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 SLC13A4Q9UKG4 626 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 CARD8Q9Y2G2 431 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 IRAK3Q9Y616 596 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 C1orf226A1L170 272 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 NPC1O15118 1278 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 MID1O15344 667 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 PDPK1O15530 556 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ZW10O43264 779 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ADAM23O75077 832 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ENTPD6O75354 484 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ADH1CP00326 375 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 MAGEA10P43363 369 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 INAVAQ3KP66 663 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 TPRG1LQ5T0D9 272 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 C10orf62Q5T681 223 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 DPPA4Q7L190 304 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 OR4N5Q8IXE1 308 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ALDH16A1Q8IZ83 802 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 Q8N9G6 341 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 OR52N2Q8NGI0 321 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 SLC38A4Q969I6 547 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 RNF31Q96EP0 1072 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 CCNB1IP1Q9NPC3 277 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 GIN1Q9NXP7 522 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 SPTBN5Q9NRC6 3674 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 FRMPD3Q5JV73 1810 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 CLCA1A8K7I4 914 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ERI3O43414 337 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 PI15O43692 258 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 GPR37L1O60883 481 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 CHMP24386 653 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 PCGF2P35227 344 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 AVPR1BP47901 424 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 CCT3P49368 545 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 NCBP2P52298 156 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 SLC16A1P53985 500 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 KEAP1Q14145 624 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 MICAQ29983 383 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 LIPKQ5VXJ0 399 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 TSEN54Q7Z6J9 526 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ARMC8Q8IUR7 673 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 GEMIN6Q8WXD5 167 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 POLR2J3Q9H1A7 115 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 CA5BQ9Y2D0 317 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 HCN4Q9Y3Q4 1203 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 TSC22D4Q9Y3Q8 395 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 INSL6Q9Y581 213 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ISM1B1AKI9 464 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 QSOX1O00391 747 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 KIAA0513O60268 411 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 KRT75O95678 551 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 EFEMP2O95967 443 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ADORA3P0DMS8 318 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 PPIBP23284 216 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 TIE1P35590 1138 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 GGT2P36268 569 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 VEZF1Q14119 521 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 DCST1Q5T197 706 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 C9orf64Q5T6V5 341 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 CADM3Q8N126 398 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 OXR1Q8N573 874 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 AMER2Q8N7J2 671 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 OR14C36Q8NHC7 312 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ZCCHC10Q8TBK6 192 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 TP53INP1Q96A56 240 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 MGLLQ99685 303 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 PIP5K1AQ99755 562 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 EHD1Q9H4M9 534 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 DDX28Q9NUL7 540 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 POU2F3Q9UKI9 436 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 CORO2BQ9UQ03 480 aa13.01□□□□□ -0.33
PRPF40B-209ENST00000548825 ZNF860A6NHJ4 632 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 RNASET2O00584 256 aaKnown RBP13□□□□□ -0.33
PRPF40B-209ENST00000548825 HYAL3O43820 417 aaPredicted RBP13□□□□□ -0.33
PRPF40B-209ENST00000548825 LCMT2O60294 686 aaKnown RBP13□□□□□ -0.33
PRPF40B-209ENST00000548825 LILRB3O75022 631 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 TIMP1P01033 207 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 IFNA14P01570 189 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 IL12RB1P42701 662 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 IL18R1Q13478 541 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 CAMK1Q14012 370 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 ZNF77Q15935 545 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 DNAJC22Q8N4W6 341 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 ANKRD53Q8N9V6 530 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 OR9Q1Q8NGQ5 310 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 HRASLS5Q96KN8 279 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 LMLNQ96KR4 655 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 AIF1LQ9BQI0 150 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 ZDHHC5Q9C0B5 715 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 BTNL2Q9UIR0 455 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 OR2A25A4D2G3 310 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 M0R082 166 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 TMPRSS11DO60235 418 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 PRMT3O60678 531 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 ARHGEF15O94989 841 aa13□□□□□ -0.33
PRPF40B-209ENST00000548825 RPLP0P05388 317 aaKnown RBP13□□□□□ -0.33
PRPF40B-209ENST00000548825 ANXA8P13928 327 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms