RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 SWT1Q5T5J6 900 aaKnown RBP18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 NANOGP8Q6NSW7 305 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 GALNT18Q6P9A2 607 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 WASH2PQ6VEQ5 465 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 OR8J3Q8NGG0 315 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 CHTF18Q8WVB6 975 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 NRG4Q8WWG1 115 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 PYDC1Q8WXC3 89 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 OR2M4Q96R27 311 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 INSM2Q96T92 566 aaPredicted RBP18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 SLC39A3Q9BRY0 314 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 TRIM15Q9C019 465 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 NT5DC2Q9H857 520 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 NANOGQ9H9S0 305 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 WASH6PQ9NQA3 447 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 LUZP4Q9P127 313 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 CIDEBQ9UHD4 219 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 ENTPD4Q9Y227 616 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 HEBP2Q9Y5Z4 205 aa18.93■□□□□ 0.62
CTDSP2-204ENST00000548823 C21orf140B9A014 251 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 CASQ2O14958 399 aaPredicted RBP18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 KCNH1O95259 989 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 PGRP06401 933 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 CXCR2P25025 360 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 SERPINB1P30740 379 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 CCL11P51671 97 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 ACSM2AQ08AH3 577 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 SLBPQ14493 270 aaKnown RBP eCLIP18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 IL11RAQ14626 422 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 MAPKAPK3Q16644 382 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 FAM174BQ3ZCQ3 159 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 C6orf10Q5SRN2 563 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 CATSPEREQ5SY80 951 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 CPZQ66K79 652 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 ACSM2BQ68CK6 577 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 SLC2A7Q6PXP3 512 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 KRT78Q8N1N4 520 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 HUS1BQ8NHY5 278 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 GTF2H4Q92759 462 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 SH3KBP1Q96B97 665 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 RNF31Q96EP0 1072 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 CGREF1Q99674 301 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 IL1RL2Q9HB29 575 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 ACTR3BQ9P1U1 418 aa18.92■□□□□ 0.62
CTDSP2-204ENST00000548823 PDZD2O15018 2839 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 AQP12BA6NM10 295 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 MAGEB17A8MXT2 336 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 KDM1AO60341 852 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 HTR1EP28566 365 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 ASMTP46597 345 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 DGKQP52824 942 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 SRSF11Q05519 484 aaKnown RBP18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 CAPRIN1Q14444 709 aaKnown RBP18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 UGT8Q16880 541 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 THEMIS2Q5TEJ8 643 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 LCN8Q6JVE9 175 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 C17orf64Q86WR6 236 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 DHFR2Q86XF0 187 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 PLXDC1Q8IUK5 500 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 AQP12AQ8IXF9 295 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 ABHD11Q8NFV4 315 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 PNPLA2Q96AD5 504 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 C12orf66Q96MD2 445 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 MTERF1Q99551 399 aaKnown RBP18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 SH3GL1Q99961 368 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 ING2Q9H160 280 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 VCX3BQ9H321 246 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 EPB41L1Q9H4G0 881 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 RMND5AQ9H871 391 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 SH2B3Q9UQQ2 575 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 WDR37Q9Y2I8 494 aa18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 TDRKHQ9Y2W6 561 aaKnown RBP18.91■□□□□ 0.62
CTDSP2-204ENST00000548823 MN1Q10571 1320 aaPredicted RBP18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 PRSS51A0A1B0GVH4 220 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 ARHGAP10A1A4S6 786 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 ERN1O75460 977 aaKnown RBP18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 BAG2O95816 211 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 TCN1P20061 433 aaPredicted RBP18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 S100A3P33764 101 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 MSX2P35548 267 aaPredicted RBP18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 SESN3P58005 492 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 CHAF1BQ13112 559 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 SPANXN4Q5MJ08 99 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 LRIF1Q5T3J3 769 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 SLC6A19Q695T7 634 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 ABRAXAS1Q6UWZ7 409 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 RNF111Q6ZNA4 994 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 PQLC1Q8N2U9 271 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 KRTCAP2Q8N6L1 136 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 FAM156AQ8NDB6 213 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 HIPK4Q8NE63 616 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 OR2L8Q8NGY9 312 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 DNAJB14Q8TBM8 379 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 CT55Q8WUE5 264 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 IL17FQ96PD4 163 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 FERD3LQ96RJ6 166 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 MFRPQ9BY79 579 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 RHBGQ9H310 441 aa18.9■□□□□ 0.62
CTDSP2-204ENST00000548823 LHX9Q9NQ69 397 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms