RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 SETDB1Q15047 1291 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 RBBP5Q15291 538 aaKnown RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 MEP1AQ16819 746 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 TMEM35AQ53FP2 167 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 C10orf62Q5T681 223 aaPredicted RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 UBAP2Q5T6F2 1119 aaKnown RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 PAPD4Q6PIY7 484 aaKnown RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 TIFABQ6ZNK6 161 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 UBE3DQ7Z6J8 389 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 CCDC71Q8IV32 467 aaPredicted RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 CA13Q8N1Q1 262 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 CEP112Q8N8E3 955 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 L3MBTL4Q8NA19 623 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 SRFBP1Q8NEF9 429 aaKnown RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 C7orf57Q8NEG2 295 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 NFAM1Q8NET5 270 aaPredicted RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 LILRB4Q8NHJ6 448 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 FAM57AQ8TBR7 257 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 ZNF473Q8WTR7 871 aaKnown RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 NINJ1Q92982 152 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 TSLPQ969D9 159 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 NXNL1Q96CM4 212 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 LPAR4Q99677 370 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 C1QTNF3Q9BXJ4 246 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 TXLNGYQ9BZA5 131 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 ROGDIQ9GZN7 287 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 REXO4Q9GZR2 422 aaKnown RBP9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 LYRM4Q9HD34 91 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 ZNF358Q9NW07 568 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 CD274Q9NZQ7 290 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 KCMF1Q9P0J7 381 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 ST6GALNAC2Q9UJ37 374 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 JMJD1CQ15652 2540 aa9.08□□□□□ -0.96
SLC48A1-206ENST00000548498 A0A1B0GTH9 108 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 ZNF860A6NHJ4 632 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 NCF1BA6NI72 391 aaPredicted RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 SAGE2PA6NJ88 616 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 NCF1CA8MVU1 366 aaPredicted RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 H0YIV9 168 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 CLGNO14967 610 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 NME2P1O60361 137 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 PRMT3O60678 531 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 HOXD4P09016 255 aaPredicted RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 NCF1P14598 390 aaPredicted RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 NME2P22392 152 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 CHRNB4P30926 498 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 TRHRP34981 398 aaPredicted RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 PTGS2P35354 604 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 GMPRP36959 345 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 RFC3P40938 356 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 HNF4AP41235 474 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 NR0B1P51843 470 aaKnown RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 ALDH18A1P54886 795 aaKnown RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 MTTPP55157 894 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 RAB38P57729 211 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 RAB8AP61006 207 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 CHIT1Q13231 466 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 RUNX2Q13950 521 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 MAPKAPK3Q16644 382 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 SFT2D3Q587I9 215 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 XKR6Q5GH73 641 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 TECRLQ5HYJ1 363 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 MFSD4BQ5TF39 518 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 MROH9Q5TGP6 573 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 LIPJQ5W064 366 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 GRHL2Q6ISB3 625 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 SLC25A25Q6KCM7 469 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 RAPH1Q70E73 1250 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 TRMT10CQ7L0Y3 403 aaKnown RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 LCA5Q86VQ0 697 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 ZNF227Q86WZ6 799 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 ZNF595Q8IYB9 648 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 TMEM151AQ8N4L1 468 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 FAM98AQ8NCA5 519 aaKnown RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 APCDD1LQ8NCL9 501 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 OR7G3Q8NG95 312 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 DCAKDQ8WVC6 231 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 KCTD4Q8WVF5 259 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 KCNC2Q96PR1 638 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 SERINC2Q96SA4 455 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 PAFAH2Q99487 392 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 MDFIQ99750 246 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 TBCDQ9BTW9 1192 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 MS4A8Q9BY19 250 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 L2HGDHQ9H9P8 463 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 PRDM7Q9NQW5 492 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 DNAJB12Q9NXW2 375 aaKnown RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 LRFN1Q9P244 771 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 TMCO1Q9UM00 188 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 DAPP1Q9UN19 280 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 PLEKHA6Q9Y2H5 1048 aa9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 TNPO3Q9Y5L0 923 aaKnown RBP9.07□□□□□ -0.96
SLC48A1-206ENST00000548498 CSPG4Q6UVK1 2322 aa9.06□□□□□ -0.96
SLC48A1-206ENST00000548498 ANKDD1BA6NHY2 528 aa9.06□□□□□ -0.96
SLC48A1-206ENST00000548498 STX16-NPEPL1H3BU86 382 aa9.06□□□□□ -0.96
SLC48A1-206ENST00000548498 UBXN8O00124 270 aa9.06□□□□□ -0.96
SLC48A1-206ENST00000548498 STX16O14662 325 aa9.06□□□□□ -0.96
SLC48A1-206ENST00000548498 ERI3O43414 337 aaKnown RBP9.06□□□□□ -0.96
SLC48A1-206ENST00000548498 CTAG2O75638 210 aa9.06□□□□□ -0.96
SLC48A1-206ENST00000548498 SLC25A12O75746 678 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms