RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 VTI1BQ9UEU0 232 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF490Q9ULM2 529 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 DAPP1Q9UN19 280 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 OARD1Q9Y530 152 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 PSAT1Q9Y617 370 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 ITPR3Q14573 2671 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 DOCK7Q96N67 2140 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 ACANP16112 2415 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 A0A088AWK7 358 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 FAM95CA0A1B0GW59 222 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 OR14I1A6ND48 311 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 RTCAO00442 366 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 AQP7O14520 342 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 TAPBPO15533 448 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 PRAMEF4O60810 478 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 PIAS1O75925 651 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 ETHE1O95571 254 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 TBX6O95947 436 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 RFPL3SP0C7P2 107 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF37AP17032 561 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 ENDOUP21128 410 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF10P21506 573 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 DNASE1P24855 282 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 HSPA7P48741 367 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 DGKQP52824 942 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 TAS2R39P59534 338 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 DR1Q01658 176 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 FOXO1Q12778 655 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 FOXD4Q12950 439 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 PRAMEF9Q5VWM5 478 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 FBXW10Q5XX13 1052 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 ABHD17CQ6PCB6 329 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 OPN5Q6U736 354 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 CAPN12Q6ZSI9 719 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 SYDE1Q6ZW31 735 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 MYRIPQ8NFW9 859 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 TTLQ8NG68 377 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 GOT1L1Q8NHS2 421 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 SARAFQ96BY9 339 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 RHBDF1Q96CC6 855 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 RMND5BQ96G75 393 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 MAPKAP1Q9BPZ7 522 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 TRIM31Q9BZY9 425 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 PRDM7Q9NQW5 492 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 ATG4BQ9Y4P1 393 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 SAR1BQ9Y6B6 198 aa11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.04□□□□□ -0.64
TRAFD1-205ENST00000548277 A0A1B0GVC2 190 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 KDM4EB2RXH2 506 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 SAP18O00422 153 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 PROM1O43490 865 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 WDR1O75083 606 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 CLEC3AO75596 197 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 TGFB1P01137 390 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 BMP5P22003 454 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 HNMTP50135 292 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 AGFG1P52594 562 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 ARL4CP56559 192 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 KCNJ2P63252 427 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 EFTUD2Q15029 972 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 SLC22A10Q63ZE4 541 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 STEAP4Q687X5 459 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 GALNT7Q86SF2 657 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 CDC20BQ86Y33 519 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 FAM13CQ8NE31 585 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 OR5L2Q8NGL0 311 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 OR14A16Q8NHC5 309 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF721Q8TF20 911 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 KIAA1191Q96A73 305 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 NAPGQ99747 312 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 WDR83Q9BRX9 315 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 SLC6A15Q9H2J7 730 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 CAB39LQ9H9S4 337 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 RASSF1Q9NS23 344 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 WWOXQ9NZC7 414 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 CORO1CQ9ULV4 474 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 TEX264Q9Y6I9 313 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 MTORP42345 2549 aa11.03□□□□□ -0.64
TRAFD1-205ENST00000548277 HEATR5AQ86XA9 2040 aa11.02□□□□□ -0.64
TRAFD1-205ENST00000548277 HRKO00198 91 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SUSD5O60279 629 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 CCNT2O60583 730 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SEC31AO94979 1220 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 PCNAP12004 261 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 CPN2P22792 545 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 PAFAH1B1P43034 410 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SLC6A12P48065 614 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 CDKL1Q00532 357 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 DOC2AQ14183 400 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 RCN2Q14257 317 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SLC25A35Q3KQZ1 300 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 PIGGQ5H8A4 983 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 ZNF793Q6ZN11 406 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 DGAT2L6Q6ZPD8 337 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 UBE3DQ7Z6J8 389 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 ZC3HC1Q86WB0 502 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 RNF175Q8N4F7 328 aa11.02□□□□□ -0.65
TRAFD1-205ENST00000548277 ACOT4Q8N9L9 421 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms