RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 NRCAMQ92823 1304 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FAM92AA1XBS5 289 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 H0YJX3 145 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TEX46H3BTG2 121 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SLC30A4O14863 429 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TLX2O43763 284 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 GADD45GO95257 159 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 CLDN9O95484 217 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 HAPLN1P10915 354 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 GPX3P22352 226 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 CPN2P22792 545 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PIGAP37287 484 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 MAGEA6P43360 314 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 RPA4Q13156 261 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 KCNC3Q14003 757 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SELPLGQ14242 412 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FGFBP1Q14512 234 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PAFAH1B3Q15102 231 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 STEAP3Q658P3 488 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 KIAA1161Q6NSJ0 714 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 GPRIN1Q7Z2K8 1008 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FAM181AQ8N9Y4 354 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 OR4K1Q8NGD4 311 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 BRSK1Q8TDC3 778 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 MAL2Q969L2 176 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TMEM125Q96AQ2 219 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FCRL4Q96PJ5 515 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TMED9Q9BVK6 235 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 NLNQ9BYT8 704 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PPIL3Q9H2H8 161 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ELAC1Q9H777 363 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ANKMY1Q9P2S6 941 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ST3GAL5Q9UNP4 418 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PPIEQ9UNP9 301 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DOCK4Q8N1I0 1966 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SMIM35A0A1B0GVV1 85 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 A0A1W2PRG6 482 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 WNT9AO14904 365 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 AREL1O15033 823 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 MID1O15344 667 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 LDB2O43679 373 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SLC28A2O43868 658 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PIP5K1CO60331 668 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SYPP08247 313 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ALPIP09923 528 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DCKP27707 260 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 CA5AP35218 305 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 KCNC1P48547 511 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 MLLT10P55197 1068 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 MAZP56270 477 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ARF5P84085 180 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 GBX1Q14549 363 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ABRAXAS2Q15018 415 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ACOX1Q15067 660 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ZBTB6Q15916 424 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 HKDC1Q2TB90 917 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 CDC73Q6P1J9 531 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PGBD2Q6P3X8 592 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 MZT2AQ6P582 158 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PAMR1Q6UXH9 720 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TMPRSS11BQ86T26 416 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SERPINA9Q86WD7 417 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TRAPPC5Q8IUR0 188 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FUNDC1Q8IVP5 155 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FAM86B1Q8N7N1 296 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TCEANCQ8N8B7 351 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 KIAA1958Q8N8K9 716 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 RTL3Q8N8U3 475 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 OR5H6Q8NGV6 325 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PHOSPHO2Q8TCD6 241 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 NETO1Q8TDF5 533 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF431Q8TF32 576 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 AP3S1Q92572 193 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FEVQ99581 238 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DPCDQ9BVM2 203 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FNDC11Q9BVV2 318 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FBXO44Q9H4M3 255 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TFB2MQ9H5Q4 396 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 RNF167Q9H6Y7 350 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 RANGRFQ9HD47 186 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 CCDC177Q9NQR7 707 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 STARD7Q9NQZ5 370 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ABCB8Q9NUT2 735 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ENPP5Q9UJA9 477 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TCFL5Q9UL49 500 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 MKLN1Q9UL63 735 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PCDHGB3Q9Y5G1 929 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 A0A1B0GW55 424 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ARHGEF33A8MVX0 844 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FAM25EA8MYX2 175 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF561-AS1K7EIQ3 104 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 KERAO60938 352 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 UPK1BO75841 260 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 OR56A5P0C7T3 313 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DUX4L2P0CJ85 424 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DUX4L3P0CJ86 424 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DUX4L4P0CJ87 422 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DUX4L5P0CJ88 424 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DUX4L6P0CJ89 424 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DUX4L7P0CJ90 424 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms