RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 I3L1I5 382 aaPredicted RBP11.39□□□□□ -0.59
HDAC7-226ENST00000547259 PEX12O00623 359 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 ZNF195O14628 629 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 DSCR3O14972 297 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 LSM1O15116 133 aaKnown RBP11.39□□□□□ -0.59
HDAC7-226ENST00000547259 KLHL18O94889 574 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 MED26O95402 600 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 B3GALT4O96024 378 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 DRD4P21917 467 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 ALAS2P22557 587 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 CERS1P27544 350 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 EPHA3P29320 983 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 TSFMP43897 325 aaKnown RBP11.39□□□□□ -0.59
HDAC7-226ENST00000547259 GCGRP47871 477 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 ARFIP1P53367 373 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 TBL3Q12788 808 aaKnown RBP11.39□□□□□ -0.59
HDAC7-226ENST00000547259 CHAF1BQ13112 559 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 FAM53BQ14153 422 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 ELOAQ14241 798 aaKnown RBP11.39□□□□□ -0.59
HDAC7-226ENST00000547259 C1orf189Q5VU69 101 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 CPZQ66K79 652 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 OR4C11Q6IEV9 310 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 RHBDD2Q6NTF9 364 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 NIPAL1Q6NVV3 410 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 EPGNQ6UW88 154 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 PRSS41Q7RTY9 318 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 PAGE2Q7Z2X7 111 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 COMMD6Q7Z4G1 85 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 UBE3DQ7Z6J8 389 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 ARHGEF39Q8N4T4 335 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 FNDC5Q8NAU1 212 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 CLEC1AQ8NC01 280 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 FDCSPQ8NFU4 85 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 OR9A4Q8NGU2 314 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 QRFPRQ96P65 431 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 EBF4Q9BQW3 602 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 TMEM120AQ9BXJ8 343 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 RABEP2Q9H5N1 569 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 AKTIPQ9H8T0 292 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 CCDC88CQ9P219 2028 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 KLHL14Q9P2G3 628 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 POLR3HQ9Y535 204 aaPredicted RBP11.39□□□□□ -0.59
HDAC7-226ENST00000547259 FER1L5A0AVI2 2057 aa11.39□□□□□ -0.59
HDAC7-226ENST00000547259 SVILO95425 2214 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 NPIPB8E9PQR5 432 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SGK494L7N484 410 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 B3GALT2O43825 422 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 PCDH7O60245 1069 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 GALR3O60755 368 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 RDH16O75452 317 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 EEDO75530 441 aaKnown RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 NSA2O95478 260 aaKnown RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SMIM10L1P0DMW3 83 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 LBPP18428 481 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 HIST1H1TP22492 207 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 MAPK1P28482 360 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 TIA1P31483 386 aaKnown RBP eCLIP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 RORAP35398 523 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 BSGP35613 385 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 IDH3AP50213 366 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 ARFIP2P53365 341 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 MTTPP55157 894 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SNRPNP63162 240 aaKnown RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 MAD2L1Q13257 205 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SSPNQ14714 243 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 NCF4Q15080 339 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 C6orf136Q5SQH8 315 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SLC6A19Q695T7 634 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 CYP20A1Q6UW02 462 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 ZNF793Q6ZN11 406 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 MAMDC2Q7Z304 686 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SPATA21Q7Z572 469 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 PDSS2Q86YH6 399 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 DTWD1Q8N5C7 304 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SLC38A9Q8NBW4 561 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 PRR7Q8TB68 274 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 PROKR1Q8TCW9 393 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 CHTF18Q8WVB6 975 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 NACC2Q96BF6 587 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 MVB12AQ96EY5 273 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 MMABQ96EY8 250 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SMIM10Q96HG1 83 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 METTL2AQ96IZ6 378 aaKnown RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 MAELQ96JY0 434 aaKnown RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 RILPQ96NA2 401 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 OR52B2Q96RD2 323 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 SERINC2Q96SA4 455 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 ELAC2Q9BQ52 826 aaKnown RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 C1orf50Q9BV19 199 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 EBPLQ9BY08 206 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 TCF7L2Q9NQB0 619 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-226ENST00000547259 ADAM29Q9UKF5 820 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 CDC14AQ9UNH5 594 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 TMED5Q9Y3A6 229 aa11.38□□□□□ -0.59
HDAC7-226ENST00000547259 GNG14A0A1W2PPG7 69 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 FOXS1O43638 330 aa11.37□□□□□ -0.59
HDAC7-226ENST00000547259 SEMA7AO75326 666 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms