RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SLC15A4Q8N697 577 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 C2CD4AQ8NCU7 369 aaPredicted RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 MBD3L2Q8NHZ7 208 aaPredicted RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 CAPZA3Q96KX2 299 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 TIMP4Q99727 224 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 WDR83Q9BRX9 315 aaKnown RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 ALOXE3Q9BYJ1 711 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 DAPP1Q9UN19 280 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 MRPS33Q9Y291 106 aaKnown RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 CHCHD2Q9Y6H1 151 aaPredicted RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 ANKRD33BA6NCL7 494 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 IL2RAP01589 272 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 C1QAP02745 245 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 IGKV3-11P04433 115 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 KCNJ1P48048 391 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 CDKN2DP55273 166 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 LIM2P55344 173 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 EFTUD2Q15029 972 aaKnown RBP eCLIP13.53□□□□□ -0.243e-9■■■■□ 23.3
RTN3-214ENST00000545432 NHSL2Q5HYW2 709 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 ANKRD22Q5VYY1 191 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 THOC6Q86W42 341 aaKnown RBP13.53□□□□□ -0.24
RTN3-214ENST00000545432 DND1Q8IYX4 353 aaKnown RBP13.53□□□□□ -0.24
RTN3-214ENST00000545432 C7orf57Q8NEG2 295 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 TTLQ8NG68 377 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 SLC2A12Q8TD20 617 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 ISL2Q96A47 359 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 KIAA1191Q96A73 305 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 LINGO1Q96FE5 620 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 FAR2Q96K12 515 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 BDH2Q9BUT1 245 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 TRIM54Q9BYV2 358 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 SLC6A15Q9H2J7 730 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 C20orf96Q9NUD7 363 aaPredicted RBP13.53□□□□□ -0.24
RTN3-214ENST00000545432 CNIH4Q9P003 139 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 BOKQ9UMX3 212 aaPredicted RBP13.53□□□□□ -0.24
RTN3-214ENST00000545432 KCNE2Q9Y6J6 123 aa13.53□□□□□ -0.24
RTN3-214ENST00000545432 H7C1Q1 480 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 B3GALT2O43825 422 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 NRDCO43847 1150 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 TRIM3O75382 744 aaPredicted RBP13.52□□□□□ -0.25
RTN3-214ENST00000545432 ETHE1O95571 254 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 CTSSP25774 331 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 PCSK6P29122 969 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 PCYT1AP49585 367 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 IL2P60568 153 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 DUSP8Q13202 625 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 SERTAD2Q14140 314 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 RBBP5Q15291 538 aaKnown RBP13.52□□□□□ -0.25
RTN3-214ENST00000545432 SF3B4Q15427 424 aaKnown RBP eCLIP13.52□□□□□ -0.25
RTN3-214ENST00000545432 PPP1R3AQ16821 1122 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 Q5PR19 223 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 FBXW10Q5XX13 1052 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 VASNQ6EMK4 673 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 ABHD17CQ6PCB6 329 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 SBSNQ6UWP8 590 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 SLCO4C1Q6ZQN7 724 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 GALNT7Q86SF2 657 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 KIAA1328Q86T90 577 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 TMEM139Q8IV31 216 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 PM20D2Q8IYS1 436 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 RASGEF1CQ8N431 466 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 OR2L5Q8NG80 312 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 SERINC2Q96SA4 455 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 CSF3RQ99062 836 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 NDNQ99608 321 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 FAM167BQ9BTA0 163 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 OR8D2Q9GZM6 311 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 PITHD1Q9GZP4 211 aaPredicted RBP13.52□□□□□ -0.25
RTN3-214ENST00000545432 EPB41L4BQ9H329 900 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 UBQLN3Q9H347 655 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 EXO5Q9H790 373 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 XAB2Q9HCS7 855 aaKnown RBP13.52□□□□□ -0.25
RTN3-214ENST00000545432 CNOT11Q9UKZ1 510 aaKnown RBP13.52□□□□□ -0.25
RTN3-214ENST00000545432 SLC22A14Q9Y267 594 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 MAD1L1Q9Y6D9 718 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 ZANQ9Y493 2812 aa13.52□□□□□ -0.25
RTN3-214ENST00000545432 A0A088AWK7 358 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 ERI3O43414 337 aaKnown RBP13.51□□□□□ -0.25
RTN3-214ENST00000545432 CLEC3AO75596 197 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 AHSGP02765 367 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 IFNA16P05015 189 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 C1GALT1C1LP0DN25 315 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 ZNF10P21506 573 aaPredicted RBP13.51□□□□□ -0.25
RTN3-214ENST00000545432 OPRM1P35372 400 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 WNT3P56703 355 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 IGLV3-21P80748 117 aaPredicted RBP13.51□□□□□ -0.25
RTN3-214ENST00000545432 RCN2Q14257 317 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 RBM20Q5T481 1227 aaKnown RBP13.51□□□□□ -0.25
RTN3-214ENST00000545432 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 VN1R5Q7Z5H4 357 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 CLNKQ7Z7G1 428 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 TMPRSS11BQ86T26 416 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 CNTN4Q8IWV2 1026 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.51□□□□□ -0.25
RTN3-214ENST00000545432 TXLNBQ8N3L3 684 aa13.51□□□□□ -0.25
RTN3-214ENST00000545432 FAM47BQ8NA70 645 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms