RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 CSHL1Q14406 222 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 CAPRIN1Q14444 709 aaKnown RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 RBBP5Q15291 538 aaKnown RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 ACKR1Q16570 336 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 PIGGQ5H8A4 983 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 DCST1Q5T197 706 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 LUZP2Q86TE4 346 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 ZNF595Q8IYB9 648 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 CCDC170Q8IYT3 715 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 RASGEF1CQ8N431 466 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 TBC1D19Q8N5T2 526 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 UBL4BQ8N7F7 174 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 TRPV3Q8NET8 790 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 OR8K3Q8NH51 312 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 OR14A16Q8NHC5 309 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 MBD3L2Q8NHZ7 208 aaPredicted RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 SLC2A12Q8TD20 617 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 ZNF721Q8TF20 911 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 DAZLQ92904 295 aaKnown RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 ISL2Q96A47 359 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 JSRP1Q96MG2 331 aaPredicted RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 QRFPRQ96P65 431 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 PIGQQ9BRB3 760 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 ALOXE3Q9BYJ1 711 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 CCDC68Q9H2F9 335 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 UBTD1Q9HAC8 227 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 HOMER3Q9NSC5 361 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 QPCTLQ9NXS2 382 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 VTI1BQ9UEU0 232 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 BOKQ9UMX3 212 aaPredicted RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 CAMK2AQ9UQM7 478 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 EIF3LQ9Y262 564 aaKnown RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 SLC6A5Q9Y345 797 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 ABCA1O95477 2261 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 NINQ8N4C6 2090 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 MIF4GDA9UHW6 222 aaKnown RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 C17orf105B2RV13 164 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 CES2O00748 559 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 ERI3O43414 337 aaKnown RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 HAUS5O94927 633 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 TBX6O95947 436 aaPredicted RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 IL18BPO95998 194 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 SAT1P21673 171 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 GDF1P27539 372 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 CERS1P27544 350 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 PTH2RP49190 550 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 TERF1P54274 439 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 ID2Q02363 134 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 SP140Q13342 867 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 MPEG1Q2M385 716 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 BBS9Q3SYG4 887 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 DUPD1Q68J44 220 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 VASNQ6EMK4 673 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 PAQR3Q6TCH7 311 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 PLXDC2Q6UX71 529 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 TMPRSS11BQ86T26 416 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 C9orf40Q8IXQ3 194 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 MAPK1IP1LQ8NDC0 245 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 OR10G3Q8NGC4 313 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 OR5L2Q8NGL0 311 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 GAL3ST3Q96A11 431 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 ZNF669Q96BR6 464 aaPredicted RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 MS4A6EQ96DS6 147 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 SPACA9Q96E40 222 aaPredicted RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 WDYHV1Q96HA8 205 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 CALR3Q96L12 384 aaKnown RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 HS3ST6Q96QI5 342 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 NDNQ99608 321 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 NPLQ9BXD5 320 aaPredicted RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 GSX2Q9BZM3 304 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 PELI2Q9HAT8 420 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 TRMT6Q9UJA5 497 aaKnown RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 CNOT11Q9UKZ1 510 aaKnown RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 TESMINQ9Y4I5 508 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 WIF1Q9Y5W5 379 aa8.6□□□□□ -1.03
CHD4-212ENST00000545083 CHCHD2Q9Y6H1 151 aaPredicted RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 EPN1Q9Y6I3 576 aaPredicted RBP8.6□□□□□ -1.03
CHD4-212ENST00000545083 ZCWPW2A0A1B0GU75 182 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 HRKO00198 91 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 AP3B1O00203 1094 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 CASKO14936 926 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 CTIFO43310 598 aaKnown RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 CTNSO60931 367 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 LDB3O75112 727 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 TRIM3O75382 744 aaPredicted RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 ERN1O75460 977 aaKnown RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 ACSL3O95573 720 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 GUCA1CO95843 209 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 C1QAP02745 245 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 TMIGD3P0DMS9 266 aaPredicted RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 PAMP19021 973 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 TNNI3P19429 210 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 CPA2P48052 419 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 PGGT1BP53609 377 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 NR1H2P55055 460 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 LIM2P55344 173 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 THOC5Q13769 683 aaKnown RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 DHX34Q14147 1143 aaKnown RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 FNDC7Q5VTL7 733 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 NXPE4Q6UWF7 544 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms