RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 TLL1O43897 1013 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 ADAP00813 363 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 GASTP01350 101 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 RPN2P04844 631 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 ADRB3P13945 408 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 CEBPBP17676 345 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 MAGEA10P43363 369 aaPredicted RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 MANFP55145 182 aaKnown RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 ZNF45Q02386 682 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 CDC20Q12834 499 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 CNTN1Q12860 1018 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 ARHGAP19Q14CB8 494 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 MAPK11Q15759 364 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 HNRNPA1L2Q32P51 320 aaKnown RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 INAVAQ3KP66 663 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 C9orf64Q5T6V5 341 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 DEPDC1Q5TB30 811 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 FRMPD2BQ6IN97 320 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 FAM83HQ6ZRV2 1179 aaPredicted RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 TRIM73Q86UV7 250 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 C12orf40Q86WS4 652 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 MMP21Q8N119 569 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 HORMAD2Q8N7B1 307 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 ZNF229Q9UJW7 825 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 PLAGL1Q9UM63 463 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 IFT52Q9Y366 437 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 MTCL1Q9Y4B5 1905 aaKnown RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 UGT2A1Q9Y4X1 527 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 INSL6Q9Y581 213 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 CFAP20Q9Y6A4 193 aaKnown RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 DOCK6Q96HP0 2047 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 PLPP1O14494 284 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 CAPN5O15484 640 aaPredicted RBP12.83□□□□□ -0.36
PPME1-208ENST00000543525 ATP6V1G1O75348 118 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 OXSR1O95747 527 aaPredicted RBP12.83□□□□□ -0.36
PPME1-208ENST00000543525 BCHEP06276 602 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 HSMCR30P0CW71 290 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 CHMP24386 653 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 PRKCDQ05655 676 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 HEPACAMQ14CZ8 416 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 DUSP7Q16829 419 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 SPDYE7PQ495Y7 208 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 TCEAL5Q5H9L2 206 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 TPRG1LQ5T0D9 272 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 FAM109BQ6ICB4 259 aaPredicted RBP12.83□□□□□ -0.36
PPME1-208ENST00000543525 PNCKQ6P2M8 343 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 CADM3Q8N126 398 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 C2orf73Q8N5S3 287 aaPredicted RBP12.83□□□□□ -0.36
PPME1-208ENST00000543525 OR5AR1Q8NGP9 310 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 CXorf40AQ8TE69 158 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 NXPE3Q969Y0 559 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 TM4SF18Q96CE8 201 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 Q96MT0 163 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 MS4A8Q9BY19 250 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 UCK2Q9BZX2 261 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 PCBD2Q9H0N5 130 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 OR51E2Q9H255 320 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 NEUROD4Q9HD90 331 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 ABCB10Q9NRK6 738 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 RHCGQ9UBD6 479 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 MGAT4BQ9UQ53 548 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 LAMA3Q16787 3333 aa12.83□□□□□ -0.36
PPME1-208ENST00000543525 M0R129 80 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 CACNB4O00305 520 aaPredicted RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 DSCR3O14972 297 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 ZW10O43264 779 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 KDM1AO60341 852 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 RECKO95980 971 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 PIPP12273 146 aaPredicted RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 OSMP13725 252 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 POU1F1P28069 291 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 GRK5P34947 590 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 CNR2P34972 360 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 BSGP35613 385 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 SOX6P35712 828 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 GSTM5P46439 218 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 EIF2B2P49770 351 aaKnown RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 CCR8P51685 355 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 SMIM11AP58511 58 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 ELAVL3Q14576 367 aaKnown RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 RPS26P11Q5JNZ5 115 aaPredicted RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 ZNF770Q6IQ21 691 aaPredicted RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 TNFAIP8L2Q6P589 184 aaPredicted RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 C11orf96Q7Z7L8 435 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 AMZ2Q86W34 360 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 SLC38A5Q8WUX1 472 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 TFGQ92734 400 aaPredicted RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 CHCHD6Q9BRQ6 235 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 ACAT2Q9BWD1 397 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 NT5DC2Q9H857 520 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 CPNE5Q9HCH3 593 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 TAC3Q9UHF0 121 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 TMEM98Q9Y2Y6 226 aa12.82□□□□□ -0.36
PPME1-208ENST00000543525 MRPS23Q9Y3D9 190 aaKnown RBP12.82□□□□□ -0.36
PPME1-208ENST00000543525 KIAA1549LQ6ZVL6 1849 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms