RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SNRNP40Q96DI7 357 aaKnown RBP15.78■□□□□ 0.12
CD9-209ENST00000540891 C19orf60Q96EN9 201 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 KCNA7Q96RP8 456 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 ALOXE3Q9BYJ1 711 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 SLC29A3Q9BZD2 475 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 BRF2Q9HAW0 419 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 ADAP2Q9NPF8 381 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 LYARQ9NX58 379 aaKnown RBP15.78■□□□□ 0.12
CD9-209ENST00000540891 MS4A12Q9NXJ0 267 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 STMN3Q9NZ72 180 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 VTI1BQ9UEU0 232 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 PHF11Q9UIL8 331 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 SLC12A4Q9UP95 1085 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 PLLPQ9Y342 182 aa15.78■□□□□ 0.12
CD9-209ENST00000540891 HELZ2Q9BYK8 2649 aaKnown RBP15.78■□□□□ 0.12
CD9-209ENST00000540891 BLACEA4D250 179 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 ESRRBO95718 433 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 UQCRHP07919 91 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 FAM58BPP0C7Q3 252 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 CHN1P15882 459 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 ST13P50502 369 aaKnown RBP15.77■□□□□ 0.12
CD9-209ENST00000540891 TNFSF10P50591 281 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 FOXA1P55317 472 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 GALNT1Q10472 559 aaPredicted RBP15.77■□□□□ 0.12
CD9-209ENST00000540891 ELAVL1Q15717 326 aaKnown RBP15.77■□□□□ 0.12
CD9-209ENST00000540891 FRMD7Q6ZUT3 714 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 C10orf107Q8IVU9 208 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 OR4N5Q8IXE1 308 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 IQCKQ8N0W5 287 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 CISD2Q8N5K1 135 aaKnown RBP15.77■□□□□ 0.12
CD9-209ENST00000540891 CCDC63Q8NA47 563 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 METTL6Q8TCB7 284 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 PTPMT1Q8WUK0 201 aaPredicted RBP15.77■□□□□ 0.12
CD9-209ENST00000540891 ZNF354BQ96LW1 612 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 RPF2Q9H7B2 306 aaKnown RBP15.77■□□□□ 0.12
CD9-209ENST00000540891 TNFRSF12AQ9NP84 129 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 TEX10Q9NXF1 929 aaPredicted RBP15.77■□□□□ 0.12
CD9-209ENST00000540891 SLC17A7Q9P2U7 560 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 TEKT2Q9UIF3 430 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 ADAM29Q9UKF5 820 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 STK38LQ9Y2H1 464 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 NTNG1Q9Y2I2 539 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 TIMM22Q9Y584 194 aa15.77■□□□□ 0.12
CD9-209ENST00000540891 DYTNA2CJ06 578 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 OR5H15A6NDH6 313 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 SPAG7O75391 227 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 AIFM1O95831 613 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 KRT6AP02538 564 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 KRT6BP04259 564 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 KLK1P06870 262 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 TUBBP07437 444 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 KRT6CP48668 564 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 FOLH1Q04609 750 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 STX4Q12846 297 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 SERTAD2Q14140 314 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 MEP1AQ16819 746 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 LIPMQ5VYY2 423 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 CYP20A1Q6UW02 462 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 COMMD6Q7Z4G1 85 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 LGI4Q8N135 537 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 ARMC10Q8N2F6 343 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 SLC5A8Q8N695 610 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 NCLNQ969V3 563 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 BARD1Q99728 777 aaKnown RBP15.76■□□□□ 0.11
CD9-209ENST00000540891 CDCP1Q9H5V8 836 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 MID1IP1Q9NPA3 183 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 ASF1BQ9NVP2 202 aa15.76■□□□□ 0.11
CD9-209ENST00000540891 GCN1Q92616 2671 aaKnown RBP15.76■□□□□ 0.11
CD9-209ENST00000540891 SHANK1Q9Y566 2161 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 TRBV11-1A0A0K0K1C0 115 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 SYNDIG1LA6NDD5 238 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 GLOD5A6NK44 160 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 PRKNO60260 465 aaPredicted RBP15.75■□□□□ 0.11
CD9-209ENST00000540891 ULK1O75385 1050 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 DDAH2O95865 285 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 IFNA16P05015 189 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 ENO1P06733 434 aaKnown RBP15.75■□□□□ 0.11
CD9-209ENST00000540891 HSD3B1P14060 373 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 HSD3B2P26439 372 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 HMOX2P30519 316 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 DEKP35659 375 aaKnown RBP15.75■□□□□ 0.11
CD9-209ENST00000540891 BUD31P41223 144 aaPredicted RBP15.75■□□□□ 0.11
CD9-209ENST00000540891 CLCN2P51788 898 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 TAS2R50P59544 299 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 NAA20P61599 178 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 CSTF3Q12996 717 aaKnown RBP15.75■□□□□ 0.11
CD9-209ENST00000540891 KRT71Q3SY84 523 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 DGAT2L6Q6ZPD8 337 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 RPS19BP1Q86WX3 136 aaKnown RBP15.75■□□□□ 0.11
CD9-209ENST00000540891 TMEM132CQ8N3T6 1108 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 ZNF321PQ8N8H1 164 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 OR1N1Q8NGS0 311 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 TCP10LQ8TDR4 215 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 TANKQ92844 425 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 VMP1Q96GC9 406 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 FAM111AQ96PZ2 611 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 GATA5Q9BWX5 397 aaPredicted RBP15.75■□□□□ 0.11
CD9-209ENST00000540891 ACPTQ9BZG2 426 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 AHSPQ9NZD4 102 aa15.75■□□□□ 0.11
CD9-209ENST00000540891 RELNP78509 3460 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms