RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 METTL25Q8N6Q8 603 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 RASSF5Q8WWW0 418 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 FAM129BQ96TA1 746 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 TTYH2Q9BSA4 534 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 ZSCAN5AQ9BUG6 496 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 FAM120CQ9NX05 1096 aaKnown RBP9.57□□□□□ -0.88
TRAF1-202ENST00000540010 GPR83Q9NYM4 423 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 ACSL6Q9UKU0 697 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 PCDHB14Q9Y5E9 798 aa9.57□□□□□ -0.88
TRAF1-202ENST00000540010 LTBP2Q14767 1821 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 A0A1B0GTL3 188 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 DAPL1A0PJW8 107 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 WNT9AO14904 365 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 YES1P07947 543 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 C7P10643 843 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 ITPKBP27987 946 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 PBX2P40425 430 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 RGS1Q08116 209 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 GRM2Q14416 872 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 FBXO43Q4G163 708 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 FOXB2Q5VYV0 432 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 ATG9BQ674R7 924 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 TUBA3EQ6PEY2 450 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 FRRS1Q6ZNA5 592 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 RTL4Q6ZR62 310 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 LRRC70Q7Z2Q7 622 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 SPARTQ8N0X7 666 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 LMLNQ96KR4 655 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 TMEM246Q9BRR3 403 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 UCK2Q9BZX2 261 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 NKX2-4Q9H2Z4 354 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 TAS2R7Q9NYW3 318 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 MARK1Q9P0L2 795 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 EIF3KQ9UBQ5 218 aaKnown RBP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 TRPS1Q9UHF7 1281 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 ASB1Q9Y576 335 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 DNMT3AQ9Y6K1 912 aaPredicted RBP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 F5P12259 2224 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 TRBV5-4A0A0C4DH59 114 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 A8MU76 341 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 E2F3O00716 465 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 MID1O15344 667 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 KIAA0513O60268 411 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 C8orf89P0DMQ9 161 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CBSLP0DN79 551 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CTSEP14091 401 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 GGT1P19440 569 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CBSP35520 551 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 GRIA2P42262 883 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 PSMD8P48556 350 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 NCBP2P52298 156 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 GRIK2Q13002 908 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 UGT3A2Q3SY77 523 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 C12orf40Q86WS4 652 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 ANKRD13BQ86YJ7 626 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CPA6Q8N4T0 437 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 OXR1Q8N573 874 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 ZFP90Q8TF47 636 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CMTM7Q96FZ5 175 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CRELD1Q96HD1 420 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 LRIG1Q96JA1 1093 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 EFCAB11Q9BUY7 163 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 KLHL31Q9H511 634 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 OLAHQ9NV23 265 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 SPEF1Q9Y4P9 236 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CEP290O15078 2479 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 IRGMA1A4Y4 181 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 KRBA1A5PL33 1030 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 H3BSH0 61 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 MATN4O95460 622 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 AMD1P17707 334 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CCR7P32248 378 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CRISP3P54108 245 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 RPS26P62854 115 aaKnown RBP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 PRR5P85299 388 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 HNRNPA0Q13151 305 aaKnown RBP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 GRIN2CQ14957 1233 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 CDKN3Q16667 212 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 DCDC5Q6ZRR9 648 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 MMAAQ8IVH4 418 aaKnown RBP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 RBM12BQ8IXT5 1001 aaKnown RBP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 TMEM102Q8N9M5 508 aaPredicted RBP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 NDNFQ8TB73 568 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 TNFAIP8L1Q8WVP5 186 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 RERGQ96A58 199 aaPredicted RBP9.56□□□□□ -0.88
TRAF1-202ENST00000540010 SIPA1Q96FS4 1042 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 FRMD6Q96NE9 622 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 LRRC3BQ96PB8 259 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 INPP5KQ9BT40 448 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 IFT27Q9BW83 186 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 DSN1Q9H410 356 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 TAC3Q9UHF0 121 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 NINQ8N4C6 2090 aa9.56□□□□□ -0.88
TRAF1-202ENST00000540010 A0A075B6Q4 140 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 EDDM13A0A1B0GTR0 161 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 C2orf92A0A1B0GVN3 265 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SLC31A1O15431 190 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 IFNGP01579 166 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 MNDAP41218 407 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 LASP1Q14847 261 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms