RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 PVRP15151 417 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 ENGP17813 658 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 CDH3P22223 829 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 PSMA4P25789 261 aaKnown RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 FRKP42685 505 aaPredicted RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 SLAMF1Q13291 335 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 ANGPT1Q15389 498 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 PEAR1Q5VY43 1037 aaPredicted RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 ERICH5Q6P6B1 374 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 RNF111Q6ZNA4 994 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 SPPL2CQ8IUH8 684 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 ERI1Q8IV48 349 aaKnown RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 DTWD1Q8N5C7 304 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 ARL10Q8N8L6 244 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 AMER3Q8N944 861 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 UTP15Q8TED0 518 aaKnown RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 ZFP90Q8TF47 636 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 CIDECQ96AQ7 238 aaPredicted RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 SMIM10Q96HG1 83 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 NSMCE2Q96MF7 247 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 FCRL4Q96PJ5 515 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 PIF1Q9H611 641 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 C1GALT1Q9NS00 363 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 CCM2LQ9NUG4 571 aaPredicted RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 ARMC1Q9NVT9 282 aa16.01■□□□□ 0.15
COPS3-212ENST00000539941 TEX10Q9NXF1 929 aaPredicted RBP16.01■□□□□ 0.15
COPS3-212ENST00000539941 A0A0G2JN53 185 aa16■□□□□ 0.15
COPS3-212ENST00000539941 TCRBV5S2A0A599 114 aa16■□□□□ 0.15
COPS3-212ENST00000539941 RHPN2P1A8MT19 583 aa16■□□□□ 0.15
COPS3-212ENST00000539941 H0YGG7 62 aa16■□□□□ 0.15
COPS3-212ENST00000539941 GSTA4O15217 222 aa16■□□□□ 0.15
COPS3-212ENST00000539941 PDPK1O15530 556 aa16■□□□□ 0.15
COPS3-212ENST00000539941 SMIM18P0DKX4 95 aa16■□□□□ 0.15
COPS3-212ENST00000539941 CNR2P34972 360 aa16■□□□□ 0.15
COPS3-212ENST00000539941 ALDH9A1P49189 494 aa16■□□□□ 0.15
COPS3-212ENST00000539941 ARF3P61204 181 aaPredicted RBP16■□□□□ 0.15
COPS3-212ENST00000539941 HBA1P69905 142 aa16■□□□□ 0.15
COPS3-212ENST00000539941 NDUFAF5Q5TEU4 345 aa16■□□□□ 0.15
COPS3-212ENST00000539941 ABHD13Q7L211 337 aa16■□□□□ 0.15
COPS3-212ENST00000539941 MMP21Q8N119 569 aa16■□□□□ 0.15
COPS3-212ENST00000539941 C19orf47Q8N9M1 422 aaKnown RBP16■□□□□ 0.15
COPS3-212ENST00000539941 KCT2Q8NC54 265 aa16■□□□□ 0.15
COPS3-212ENST00000539941 OR5P2Q8WZ92 322 aa16■□□□□ 0.15
COPS3-212ENST00000539941 ZC3H10Q96K80 434 aaKnown RBP16■□□□□ 0.15
COPS3-212ENST00000539941 NLNQ9BYT8 704 aa16■□□□□ 0.15
COPS3-212ENST00000539941 RAD21L1Q9H4I0 556 aa16■□□□□ 0.15
COPS3-212ENST00000539941 NEUROD4Q9HD90 331 aa16■□□□□ 0.15
COPS3-212ENST00000539941 ACSS1Q9NUB1 689 aaPredicted RBP16■□□□□ 0.15
COPS3-212ENST00000539941 EPHA6Q9UF33 1036 aa16■□□□□ 0.15
COPS3-212ENST00000539941 RAB26Q9ULW5 256 aa16■□□□□ 0.15
COPS3-212ENST00000539941 FAF1Q9UNN5 650 aaPredicted RBP16■□□□□ 0.15
COPS3-212ENST00000539941 USP22Q9UPT9 525 aa16■□□□□ 0.15
COPS3-212ENST00000539941 hCG_2014768A0A024R1R8 64 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 TMEM247A6NEH6 219 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 NUDT21O43809 227 aaKnown RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 ZNF888P0CJ79 500 aaPredicted RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 NCK1P16333 377 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 CERS1P27544 350 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 HOXD12P35452 270 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 NBL1P41271 181 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 NR1H2P55055 460 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 PCBP4P57723 403 aaKnown RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 RAB8AP61006 207 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 PPP1CAP62136 330 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 BNC1Q01954 994 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 SRSF5Q13243 272 aaKnown RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 MLC1Q15049 377 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 PRSS53Q2L4Q9 553 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 ZC3H12BQ5HYM0 836 aaKnown RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 CPZQ66K79 652 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 ZNF438Q7Z4V0 828 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 SLC25A45Q8N413 288 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 ZBED6CLQ96FA7 236 aaPredicted RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 SERINC2Q96SA4 455 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 CD180Q99467 661 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 CHRNA10Q9GZZ6 450 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 KLHL25Q9H0H3 589 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 RPF2Q9H7B2 306 aaKnown RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 PRDM9Q9NQV7 894 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 CACNA1EQ15878 2313 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 TMEM131Q92545 1883 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 NUP214P35658 2090 aaPredicted RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 LOC105369274A0A096LPK9 316 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 LOC102723532A0A0G2JNH3 316 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 TXNDC9O14530 226 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 P2RX6O15547 441 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 TRMUO75648 421 aaKnown RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 EIF2S1P05198 315 aaKnown RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 ST6GAL1P15907 406 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 HOXB6P17509 224 aaKnown RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 EFNA1P20827 205 aaPredicted RBP15.99■□□□□ 0.15
COPS3-212ENST00000539941 IL10P22301 178 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 BTN3A2P78410 334 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 GAB1Q13480 694 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 SHBQ15464 509 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 CYP51A1Q16850 503 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 FRMPD2BQ6IN97 320 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 RABEPKQ7Z6M1 372 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 OR4N4Q8N0Y3 316 aa15.99■□□□□ 0.15
COPS3-212ENST00000539941 CARFQ8N187 725 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms