RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 C17orf105B2RV13 164 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 KLK8O60259 260 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 OR2J2O76002 312 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 TNNI3P19429 210 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 GRNP28799 593 aaKnown RBP20.63■□□□□ 0.89
SCARB1-206ENST00000539320 PTGER1P34995 402 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 RFC3P40938 356 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 SMSP52788 366 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 PCBP2Q15366 365 aaKnown RBP eCLIP20.63■□□□□ 0.891e-13■□□□□ 8.9
SCARB1-206ENST00000539320 LIPJQ5W064 366 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 SP5Q6BEB4 398 aaPredicted RBP20.63■□□□□ 0.89
SCARB1-206ENST00000539320 RELL1Q8IUW5 271 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 LURAP1LQ8IV03 231 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 SLC2A12Q8TD20 617 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 SREK1Q8WXA9 508 aaKnown RBP20.63■□□□□ 0.89
SCARB1-206ENST00000539320 RGMAQ96B86 450 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 GPR78Q96P69 363 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 VPS11Q9H270 941 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 LIN28AQ9H9Z2 209 aaKnown RBP20.63■□□□□ 0.89
SCARB1-206ENST00000539320 CPSF2Q9P2I0 782 aaKnown RBP20.63■□□□□ 0.89
SCARB1-206ENST00000539320 MYOTQ9UBF9 498 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 TSC22D4Q9Y3Q8 395 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 PCDHGA11Q9Y5H2 935 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 CELSR2Q9HCU4 2923 aa20.63■□□□□ 0.89
SCARB1-206ENST00000539320 LRRC14BA6NHZ5 514 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 PLPP1O14494 284 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 UGDHO60701 494 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 TUBB4AP04350 444 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 INHBAP08476 426 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 COX7A2P14406 83 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 PIK3CGP48736 1102 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 HK2P52789 917 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 GPR85P60893 370 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 GTF2H2Q13888 395 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 TECRLQ5HYJ1 363 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 OR4C11Q6IEV9 310 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 GTF2H2CQ6P1K8 395 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 XKRXQ6PP77 449 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 GOLGA7Q7Z5G4 137 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 ZNF321PQ8N8H1 164 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 ZFP62Q8NB50 900 aaPredicted RBP20.62■□□□□ 0.89
SCARB1-206ENST00000539320 PSD4Q8NDX1 1056 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 C7orf57Q8NEG2 295 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 ANKRD9Q96BM1 317 aaPredicted RBP20.62■□□□□ 0.89
SCARB1-206ENST00000539320 REPS1Q96D71 796 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 RASL10BQ96S79 203 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 MTERF1Q99551 399 aaKnown RBP20.62■□□□□ 0.89
SCARB1-206ENST00000539320 FUT8Q9BYC5 575 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 CDC42EP4Q9H3Q1 356 aaKnown RBP20.62■□□□□ 0.89
SCARB1-206ENST00000539320 PHF11Q9UIL8 331 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 MEMO1Q9Y316 297 aa20.62■□□□□ 0.89
SCARB1-206ENST00000539320 TNPO3Q9Y5L0 923 aaKnown RBP20.62■□□□□ 0.89
SCARB1-206ENST00000539320 WWP2O00308 870 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 ZNHIT1O43257 154 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 FGF17O60258 216 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 OR6B1O95007 311 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 ACSL3O95573 720 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 AGAP20933 346 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 SOX3P41225 446 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 STT3AP46977 705 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 RPS13P62277 151 aaKnown RBP20.61■□□□□ 0.89
SCARB1-206ENST00000539320 IGLV3-21P80748 117 aaPredicted RBP20.61■□□□□ 0.89
SCARB1-206ENST00000539320 TNFRSF17Q02223 184 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 SLAMF1Q13291 335 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 FGD2Q7Z6J4 655 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 ZCCHC7Q8N3Z6 543 aaKnown RBP20.61■□□□□ 0.89
SCARB1-206ENST00000539320 MMGT1Q8N4V1 131 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 OR8K3Q8NH51 312 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 C16orf52Q8NHV5 167 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 AGAP11Q8TF27 550 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 SLC44A1Q8WWI5 657 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 ISL2Q96A47 359 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 DGAT2Q96PD7 388 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 TSPYL1Q9H0U9 437 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 MS4A12Q9NXJ0 267 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 COPS7AQ9UBW8 275 aa20.61■□□□□ 0.89
SCARB1-206ENST00000539320 H0YIV9 168 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 PRRG2O14669 202 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 HS6ST1O60243 411 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 SIX3O95343 332 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-206ENST00000539320 ETHE1O95571 254 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 HTR1EP28566 365 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 MAGEA12P43365 314 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 ARFIP1P53367 373 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 HNRNPH2P55795 449 aaKnown RBP20.6■□□□□ 0.89
SCARB1-206ENST00000539320 RNF4P78317 190 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 PLIN5Q00G26 463 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 ZNF630Q2M218 657 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-206ENST00000539320 CMPK2Q5EBM0 449 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 METTL2BQ6P1Q9 378 aaKnown RBP20.6■□□□□ 0.89
SCARB1-206ENST00000539320 IL20RBQ6UXL0 311 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 TAOK1Q7L7X3 1001 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 EID3Q8N140 333 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 PTGR2Q8N8N7 351 aaPredicted RBP20.6■□□□□ 0.89
SCARB1-206ENST00000539320 NOA1Q8NC60 698 aaKnown RBP20.6■□□□□ 0.89
SCARB1-206ENST00000539320 OR5L2Q8NGL0 311 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 FMO2Q99518 471 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 RPF2Q9H7B2 306 aaKnown RBP20.6■□□□□ 0.89
SCARB1-206ENST00000539320 IPPKQ9H8X2 491 aa20.6■□□□□ 0.89
SCARB1-206ENST00000539320 DMGDHQ9UI17 866 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms