RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 PHF11Q9UIL8 331 aa11.07□□□□□ -0.64
SPARC-207ENST00000537849 PACSIN3Q9UKS6 424 aa11.07□□□□□ -0.64
SPARC-207ENST00000537849 TMEM184BQ9Y519 407 aaPredicted RBP11.07□□□□□ -0.64
SPARC-207ENST00000537849 A0A1W2PRB8 838 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 MYO1GB0I1T2 1018 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 NME4O00746 187 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 RFXANKO14593 260 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 RDH16O75452 317 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 C6orf47O95873 294 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 ZCCHC18P0CG32 403 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 PDX1P52945 283 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 RAB38P57729 211 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 HBA1P69905 142 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 E2F1Q01094 437 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 TNFRSF17Q02223 184 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 LRRC74AQ0VAA2 488 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 ILKQ13418 452 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 SELPLGQ14242 412 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 CEBPEQ15744 281 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 AASDHQ4L235 1098 aaPredicted RBP11.06□□□□□ -0.64
SPARC-207ENST00000537849 RABL3Q5HYI8 236 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 C6orf10Q5SRN2 563 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 PHF19Q5T6S3 580 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 STPG1Q5TH74 334 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 YOD1Q5VVQ6 348 aaPredicted RBP11.06□□□□□ -0.64
SPARC-207ENST00000537849 NIPAL1Q6NVV3 410 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 FAM180BQ6P0A1 224 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 BNC2Q6ZN30 1099 aaPredicted RBP11.06□□□□□ -0.64
SPARC-207ENST00000537849 ZNF621Q6ZSS3 439 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 HPS6Q86YV9 775 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 ARHGAP24Q8N264 748 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 TTC29Q8NA56 475 aaPredicted RBP11.06□□□□□ -0.64
SPARC-207ENST00000537849 TMEM52Q8NDY8 209 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 FAM13CQ8NE31 585 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 OR5P2Q8WZ92 322 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 MCUR1Q96AQ8 359 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 EXOSC8Q96B26 276 aaKnown RBP11.06□□□□□ -0.64
SPARC-207ENST00000537849 CSF3RQ99062 836 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 TRIM8Q9BZR9 551 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 IKZF5Q9H5V7 419 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 ACSS1Q9NUB1 689 aaPredicted RBP11.06□□□□□ -0.64
SPARC-207ENST00000537849 OCIAD1Q9NX40 245 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 ADA2Q9NZK5 511 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 GMPR2Q9P2T1 348 aaKnown RBP11.06□□□□□ -0.64
SPARC-207ENST00000537849 UTS2RQ9UKP6 389 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 GMEB1Q9Y692 573 aa11.06□□□□□ -0.64
SPARC-207ENST00000537849 A0A1W2PS29 197 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 PRORSD1PA6NEY8 169 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 H0YIG0 161 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 DSCR3O14972 297 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 PDPK1O15530 556 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 HYAL3O43820 417 aaPredicted RBP11.05□□□□□ -0.64
SPARC-207ENST00000537849 FOXD2O60548 495 aaPredicted RBP11.05□□□□□ -0.64
SPARC-207ENST00000537849 PDE5AO76074 875 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 NR2F6P10588 404 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 DDX5P17844 614 aaKnown RBP11.05□□□□□ -0.64
SPARC-207ENST00000537849 TLX1P31314 330 aaPredicted RBP11.05□□□□□ -0.64
SPARC-207ENST00000537849 BUD31P41223 144 aaPredicted RBP11.05□□□□□ -0.64
SPARC-207ENST00000537849 AVPR1BP47901 424 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 GZMMP51124 257 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 SLC7A2P52569 658 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 ARSFP54793 590 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 DUSP2Q05923 314 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 MLC1Q15049 377 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 ZNF750Q32MQ0 723 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 CDCP2Q5VXM1 449 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 TTLL10Q6ZVT0 673 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 MED25Q71SY5 747 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 GLRX5Q86SX6 157 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 GPR135Q8IZ08 494 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 BMPERQ8N8U9 685 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 MVB12AQ96EY5 273 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 CNRIP1Q96F85 164 aaPredicted RBP11.05□□□□□ -0.64
SPARC-207ENST00000537849 AMDHD1Q96NU7 426 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 OR6C1Q96RD1 312 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 PANX1Q96RD7 426 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 CPPED1Q9BRF8 314 aaPredicted RBP11.05□□□□□ -0.64
SPARC-207ENST00000537849 GLIPR2Q9H4G4 154 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 EPS8L2Q9H6S3 715 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 RPF2Q9H7B2 306 aaKnown RBP11.05□□□□□ -0.64
SPARC-207ENST00000537849 SPAG4Q9NPE6 437 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 IRAK4Q9NWZ3 460 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 TOR4AQ9NXH8 423 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 SLC7A8Q9UHI5 535 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 PSME2Q9UL46 239 aa11.05□□□□□ -0.64
SPARC-207ENST00000537849 ERAL1O75616 437 aaKnown RBP11.04□□□□□ -0.64
SPARC-207ENST00000537849 C8orf89P0DMQ9 161 aa11.04□□□□□ -0.64
SPARC-207ENST00000537849 FGF5P12034 268 aa11.04□□□□□ -0.64
SPARC-207ENST00000537849 RNH1P13489 461 aaKnown RBP11.04□□□□□ -0.64
SPARC-207ENST00000537849 HSD17B1P14061 328 aa11.04□□□□□ -0.64
SPARC-207ENST00000537849 CSNK2A2P19784 350 aaPredicted RBP11.04□□□□□ -0.64
SPARC-207ENST00000537849 ALAS2P22557 587 aa11.04□□□□□ -0.64
SPARC-207ENST00000537849 ME2P23368 584 aa11.04□□□□□ -0.64
SPARC-207ENST00000537849 CCKBRP32239 447 aa11.04□□□□□ -0.64
SPARC-207ENST00000537849 CSTF2P33240 577 aaKnown RBP eCLIP11.04□□□□□ -0.64
SPARC-207ENST00000537849 MSX2P35548 267 aaPredicted RBP11.04□□□□□ -0.64
SPARC-207ENST00000537849 MANFP55145 182 aaKnown RBP11.04□□□□□ -0.64
SPARC-207ENST00000537849 EEFSECP57772 596 aaKnown RBP11.04□□□□□ -0.64
SPARC-207ENST00000537849 SKP1P63208 163 aa11.04□□□□□ -0.64
SPARC-207ENST00000537849 ELF3P78545 371 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms