RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 TRMOQ9BU70 441 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 TUBB6Q9BUF5 446 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 ARGLU1Q9NWB6 273 aaPredicted RBP16.75■□□□□ 0.27
DDX55-204ENST00000536079 ZNF446Q9NWS9 450 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 PCDHGA9Q9Y5G4 932 aaKnown RBP16.75■□□□□ 0.27
DDX55-204ENST00000536079 DNAJC15Q9Y5T4 150 aa16.75■□□□□ 0.27
DDX55-204ENST00000536079 GOLGA6L10A6NI86 522 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 PCDH17O14917 1159 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 BIRC5O15392 142 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 CRCPO75575 148 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 CD97P48960 835 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 ACTN3Q08043 901 aaPredicted RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 LACTB2Q53H82 288 aaPredicted RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 B3GNTL1Q67FW5 361 aaPredicted RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 TCTN3Q6NUS6 607 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 DGAT2L6Q6ZPD8 337 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 PTRH1Q86Y79 214 aaKnown RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 KBTBD2Q8IY47 623 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 ZNF843Q8N446 348 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 KIF2BQ8N4N8 673 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 GBP7Q8N8V2 638 aaPredicted RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 BRIX1Q8TDN6 353 aaKnown RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 DOK4Q8TEW6 326 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 TM4SF18Q96CE8 201 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 SMAD5Q99717 465 aaKnown RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 PAIP2Q9BPZ3 127 aaKnown RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 ALOXE3Q9BYJ1 711 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 LHPPQ9H008 270 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 STMN4Q9H169 189 aaPredicted RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 RPF2Q9H7B2 306 aaKnown RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 PNO1Q9NRX1 252 aaKnown RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 RIC8BQ9NVN3 520 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 LYARQ9NX58 379 aaKnown RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 AHSPQ9NZD4 102 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 C19orf25Q9UFG5 118 aaPredicted RBP16.74■□□□□ 0.27
DDX55-204ENST00000536079 ADAM29Q9UKF5 820 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 TRAF6Q9Y4K3 522 aa16.74■□□□□ 0.27
DDX55-204ENST00000536079 H3BQF6 201 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 CLDN4O14493 209 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 MAN1A2O60476 641 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 SERPINE1P05121 402 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 SERPINA7P05543 415 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 FGF4P08620 206 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 ST13P50502 369 aaKnown RBP16.73■□□□□ 0.27
DDX55-204ENST00000536079 SLC26A5P58743 744 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 NFATC3Q12968 1075 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 BTBD16Q32M84 506 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 SH2D4BQ5SQS7 431 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 PLAG1Q6DJT9 500 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 Q6ZSR9 355 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 ASB18Q6ZVZ8 466 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 SIRT6Q8N6T7 355 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 SORT1Q99523 831 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 NPAS2Q99743 824 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 EBPLQ9BY08 206 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 C5AR2Q9P296 337 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 PHF11Q9UIL8 331 aa16.73■□□□□ 0.27
DDX55-204ENST00000536079 MRPS33Q9Y291 106 aaKnown RBP16.73■□□□□ 0.27
DDX55-204ENST00000536079 SAGE2PA6NJ88 616 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 LINC00032P0C843 101 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 NR2F6P10588 404 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 PGDP52209 483 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 MAPK12P53778 367 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 ABCE1P61221 599 aaKnown RBP16.72■□□□□ 0.27
DDX55-204ENST00000536079 IGLV3-21P80748 117 aaPredicted RBP16.72■□□□□ 0.27
DDX55-204ENST00000536079 FOLH1Q04609 750 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 ZNF33BQ06732 778 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 ZNF750Q32MQ0 723 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 NDUFAF5Q5TEU4 345 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 FCRLBQ6BAA4 426 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 CLYBLQ8N0X4 340 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 ZNF321PQ8N8H1 164 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 DNAJB14Q8TBM8 379 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 PTPMT1Q8WUK0 201 aaPredicted RBP16.72■□□□□ 0.27
DDX55-204ENST00000536079 PPWD1Q96BP3 646 aaKnown RBP16.72■□□□□ 0.27
DDX55-204ENST00000536079 VPS50Q96JG6 964 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 ATP6V1G3Q96LB4 118 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 C3orf30Q96M34 536 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 LPAR4Q99677 370 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 VIPAS39Q9H9C1 493 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 MS4A12Q9NXJ0 267 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 PTGFRNQ9P2B2 879 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 HEY2Q9UBP5 337 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 GIMAP2Q9UG22 337 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 ZNF223Q9UK11 482 aaPredicted RBP16.72■□□□□ 0.27
DDX55-204ENST00000536079 CSAG2Q9Y5P2 127 aa16.72■□□□□ 0.27
DDX55-204ENST00000536079 DOCK10Q96BY6 2186 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 PIP5K1BO14986 540 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 PCDH7O60245 1069 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 MYO1DO94832 1006 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 JUNP05412 331 aaKnown RBP16.71■□□□□ 0.27
DDX55-204ENST00000536079 SOX11P35716 441 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 GPR143P51810 404 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 SLC18A1P54219 525 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 KIAA0040Q15053 153 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 PRSS53Q2L4Q9 553 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 NADK2Q4G0N4 442 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 SPDYAQ5MJ70 313 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 VWA5B1Q5TIE3 1220 aa16.71■□□□□ 0.27
DDX55-204ENST00000536079 HHATQ5VTY9 493 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms