RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 ZRSR2Q15696 482 aaKnown RBP9.72□□□□□ -0.85
CAPN1-225ENST00000533704 GLE1Q53GS7 698 aaKnown RBP9.72□□□□□ -0.85
CAPN1-225ENST00000533704 DEPDC1Q5TB30 811 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 LIPJQ5W064 366 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 CYP20A1Q6UW02 462 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF227Q86WZ6 799 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 ZNF321PQ8N8H1 164 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 OR14A16Q8NHC5 309 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 DOK4Q8TEW6 326 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 ASB15Q8WXK1 588 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 DAZLQ92904 295 aaKnown RBP9.72□□□□□ -0.85
CAPN1-225ENST00000533704 MTFMTQ96DP5 389 aaKnown RBP9.72□□□□□ -0.85
CAPN1-225ENST00000533704 GPR137Q96N19 417 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 CDK15Q96Q40 435 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 NOL11Q9H8H0 719 aaKnown RBP9.72□□□□□ -0.85
CAPN1-225ENST00000533704 XPR1Q9UBH6 696 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 KLF13Q9Y2Y9 288 aaPredicted RBP9.72□□□□□ -0.85
CAPN1-225ENST00000533704 PCDHGA11Q9Y5H2 935 aa9.72□□□□□ -0.85
CAPN1-225ENST00000533704 ASPDHA6ND91 283 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 A8MVJ9 347 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 PLPP1O14494 284 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 OR7A17O14581 309 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TFECO14948 347 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 FGF17O60258 216 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 CDC40O60508 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 SCELO95171 688 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 CLDN9O95484 217 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TUBB4AP04350 444 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 RHOXF2BP0C7M4 288 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 ESRRAP11474 423 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 COX7A2P14406 83 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 ABOP16442 354 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 PTX3P26022 381 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TLX1P31314 330 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TRHRP34981 398 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 DCTP40126 519 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 CA7P43166 264 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 GPR143P51810 404 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 NEK2P51955 445 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 CCNG1P51959 295 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 HNRNPH2P55795 449 aaKnown RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 GPR85P60893 370 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 HSF1Q00613 529 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TNFRSF17Q02223 184 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 PCBP2Q15366 365 aaKnown RBP eCLIP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 C3AR1Q16581 482 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TSNAXIP1Q2TAA8 658 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 KRTCAP3Q53RY4 240 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 SGO1Q5FBB7 561 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 RNFT1Q5M7Z0 435 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TEX35Q5T0J7 233 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 C18orf63Q68DL7 685 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TTC19Q6DKK2 380 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 IL20RBQ6UXL0 311 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 HSDL2Q6YN16 418 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 RPS27LQ71UM5 84 aaKnown RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 GPR180Q86V85 440 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 CEP112Q8N8E3 955 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 MORN4Q8NDC4 146 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 OR52B6Q8NGF0 335 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 SLC2A12Q8TD20 617 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 PTPMT1Q8WUK0 201 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 DCAKDQ8WVC6 231 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 RELTQ969Z4 430 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 ANKRD9Q96BM1 317 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 PPWD1Q96BP3 646 aaKnown RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TRIM44Q96DX7 344 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 NSUN5Q96P11 429 aaKnown RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 DGAT2Q96PD7 388 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 RHOXF2Q9BQY4 288 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 FUT8Q9BYC5 575 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 RPF2Q9H7B2 306 aaKnown RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TIMMDC1Q9NPL8 285 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 SEMA4BQ9NPR2 832 aaPredicted RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 HPF1Q9NWY4 346 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 COPS7AQ9UBW8 275 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 VTI1BQ9UEU0 232 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 PHF11Q9UIL8 331 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 TINAGQ9UJW2 476 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 YARS2Q9Y2Z4 477 aaKnown RBP9.71□□□□□ -0.86
CAPN1-225ENST00000533704 PKDREJQ9NTG1 2253 aa9.71□□□□□ -0.86
CAPN1-225ENST00000533704 NCOA6Q14686 2063 aaPredicted RBP9.7□□□□□ -0.86
CAPN1-225ENST00000533704 ARHGAP10A1A4S6 786 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 SYNDIG1LA6NDD5 238 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 GLOD5A6NK44 160 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 PRSS44E7EML9 344 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 G3V3Y1 287 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 H0YIV9 168 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 KLRC4-KLRK1H3BQV0 150 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 ASNA1O43681 348 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 DYRK3O43781 588 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 PEX1O43933 1283 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 UGDHO60701 494 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 EEDO75530 441 aaKnown RBP9.7□□□□□ -0.86
CAPN1-225ENST00000533704 OR6B1O95007 311 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 ETHE1O95571 254 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 GBAP04062 536 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 SNRPAP09012 282 aaKnown RBP9.7□□□□□ -0.86
CAPN1-225ENST00000533704 NR2F6P10588 404 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms