RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 C6orf203Q9P0P8 240 aaPredicted RBP17.52■□□□□ 0.39
SMPD1-208ENST00000533123 RAPGEFL1Q9UHV5 662 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 AP4S1Q9Y587 144 aa17.52■□□□□ 0.39
SMPD1-208ENST00000533123 BSGP35613 385 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 FXNQ16595 210 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 MSANTD1Q6ZTZ1 278 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 PIP4P1Q86T03 277 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 DTWD1Q8N5C7 304 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 AMER3Q8N944 861 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 GBP5Q96PP8 586 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 TBCDQ9BTW9 1192 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 RPF2Q9H7B2 306 aaKnown RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 IRAK4Q9NWZ3 460 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 FAM120CQ9NX05 1096 aaKnown RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 SH3BP4Q9P0V3 963 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 LRCH1Q9Y2L9 728 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 MRPS2Q9Y399 296 aaKnown RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 NUP214P35658 2090 aaPredicted RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 CNOT1A5YKK6 2376 aaKnown RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 ANKRD34CP0C6C1 535 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF888P0CJ79 500 aaPredicted RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 CLPPQ16740 277 aaPredicted RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 OR4C11Q6IEV9 310 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 TRIM40Q6P9F5 258 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 ABHD17CQ6PCB6 329 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 IZUMO2Q6UXV1 221 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF655Q8N720 491 aaPredicted RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 STARD8Q92502 1023 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 TEFMQ96QE5 360 aaKnown RBP17.51■□□□□ 0.39
SMPD1-208ENST00000533123 TSC22D3Q99576 134 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 TRIM15Q9C019 465 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 REEP4Q9H6H4 257 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 PCDHB3Q9Y5E6 796 aa17.51■□□□□ 0.39
SMPD1-208ENST00000533123 AQP12BA6NM10 295 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 ZSCAN9O15535 394 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-208ENST00000533123 CPSF4O95639 269 aaKnown RBP17.5■□□□□ 0.39
SMPD1-208ENST00000533123 SLC7A1P30825 629 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 C2orf80Q0P641 193 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 TRIP6Q15654 476 aaKnown RBP17.5■□□□□ 0.39
SMPD1-208ENST00000533123 TMTC4Q5T4D3 741 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF793Q6ZN11 406 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 CAMKMTQ7Z624 323 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 AQP12AQ8IXF9 295 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 OR2T12Q8NG77 320 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 DNAJB8Q8NHS0 232 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 UTP15Q8TED0 518 aaKnown RBP17.5■□□□□ 0.39
SMPD1-208ENST00000533123 COQ8BQ96D53 544 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 KCNC2Q96PR1 638 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 SPRTNQ9H040 489 aaPredicted RBP17.5■□□□□ 0.39
SMPD1-208ENST00000533123 KAT8Q9H7Z6 458 aaKnown RBP17.5■□□□□ 0.39
SMPD1-208ENST00000533123 MYNNQ9NPC7 610 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 PRDM7Q9NQW5 492 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 AURKCQ9UQB9 309 aa17.5■□□□□ 0.39
SMPD1-208ENST00000533123 TCRBV5S2A0A599 114 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 TMEM150CB9EJG8 249 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 CASQ2O14958 399 aaPredicted RBP17.49■□□□□ 0.39
SMPD1-208ENST00000533123 IL3P08700 152 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 FURINP09958 794 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 SSR2P43308 183 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 PRSS53Q2L4Q9 553 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 CCNYL2Q5T2Q4 361 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 OR52E8Q6IFG1 317 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 FAM71E1Q6IPT2 247 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 TMEM214Q6NUQ4 689 aaKnown RBP17.49■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF551Q7Z340 670 aaPredicted RBP17.49■□□□□ 0.39
SMPD1-208ENST00000533123 DEFB124Q8NES8 71 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 OR8K5Q8NH50 307 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 LRTOMTQ8WZ04 291 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 GAL3ST3Q96A11 431 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 CIDECQ96AQ7 238 aaPredicted RBP17.49■□□□□ 0.39
SMPD1-208ENST00000533123 DUS3LQ96G46 650 aaKnown RBP17.49■□□□□ 0.39
SMPD1-208ENST00000533123 NLNQ9BYT8 704 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 MUC13Q9H3R2 512 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 TOR4AQ9NXH8 423 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 ATP6V1HQ9UI12 483 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 V9GYQ6 96 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 CEP250Q9BV73 2442 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 DHRS12A0PJE2 317 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 RFPL3O75679 317 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 PDX1P52945 283 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 BTN3A2P78410 334 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 CYP51A1Q16850 503 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 DEFB134Q4QY38 66 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 MANEAQ5SRI9 462 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 GLYATQ6IB77 296 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF621Q6ZSS3 439 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 NUDT13Q86X67 352 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 CLEC4FQ8N1N0 589 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 SRFBP1Q8NEF9 429 aaKnown RBP17.49■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF285Q96NJ3 590 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 SH3GL1Q99961 368 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 SEMA6AQ9H2E6 1030 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 FGF21Q9NSA1 209 aa17.49■□□□□ 0.39
SMPD1-208ENST00000533123 URADA6NGE7 173 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 TIPRLO75663 272 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 CLDN6P56747 220 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 ZFP36L1Q07352 338 aaKnown RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 PRTGQ2VWP7 1150 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 FAM180BQ6P0A1 224 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 PRSS41Q7RTY9 318 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms