RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 AGKQ53H12 422 aa2.57□□□□□ -2
CD44-234ENST00000531873 CMPK2Q5EBM0 449 aa2.57□□□□□ -2
CD44-234ENST00000531873 LIPKQ5VXJ0 399 aa2.57□□□□□ -2
CD44-234ENST00000531873 LIPJQ5W064 366 aa2.57□□□□□ -2
CD44-234ENST00000531873 ARHGAP17Q68EM7 881 aa2.57□□□□□ -2
CD44-234ENST00000531873 CDC42EP5Q6NZY7 148 aa2.57□□□□□ -2
CD44-234ENST00000531873 FAM159AQ6UWV7 190 aa2.57□□□□□ -2
CD44-234ENST00000531873 Q6ZRP5 223 aa2.57□□□□□ -2
CD44-234ENST00000531873 Q6ZSR9 355 aa2.57□□□□□ -2
CD44-234ENST00000531873 CDHR3Q6ZTQ4 885 aa2.57□□□□□ -2
CD44-234ENST00000531873 TMEM26Q6ZUK4 368 aa2.57□□□□□ -2
CD44-234ENST00000531873 PTAR1Q7Z6K3 402 aaPredicted RBP2.57□□□□□ -2
CD44-234ENST00000531873 YRDCQ86U90 279 aaKnown RBP2.57□□□□□ -2
CD44-234ENST00000531873 ITIH5Q86UX2 942 aa2.57□□□□□ -2
CD44-234ENST00000531873 C17orf64Q86WR6 236 aa2.57□□□□□ -2
CD44-234ENST00000531873 LMNTD2Q8IXW0 634 aa2.57□□□□□ -2
CD44-234ENST00000531873 CNPY4Q8N129 248 aa2.57□□□□□ -2
CD44-234ENST00000531873 PARP8Q8N3A8 854 aa2.57□□□□□ -2
CD44-234ENST00000531873 LRRC17Q8N6Y2 441 aa2.57□□□□□ -2
CD44-234ENST00000531873 FAM71CQ8NEG0 241 aa2.57□□□□□ -2
CD44-234ENST00000531873 OR52B4Q8NGK2 314 aa2.57□□□□□ -2
CD44-234ENST00000531873 C8orf46Q8TAG6 207 aa2.57□□□□□ -2
CD44-234ENST00000531873 CCDC110Q8TBZ0 833 aa2.57□□□□□ -2
CD44-234ENST00000531873 PCED1BQ96HM7 432 aa2.57□□□□□ -2
CD44-234ENST00000531873 RPGRIP1Q96KN7 1286 aa2.57□□□□□ -2
CD44-234ENST00000531873 RAB40CQ96S21 281 aa2.57□□□□□ -2
CD44-234ENST00000531873 CBWD1Q9BRT8 395 aa2.57□□□□□ -2
CD44-234ENST00000531873 PAPOLGQ9BWT3 736 aaKnown RBP2.57□□□□□ -2
CD44-234ENST00000531873 ATG10Q9H0Y0 220 aa2.57□□□□□ -2
CD44-234ENST00000531873 SLC26A1Q9H2B4 701 aa2.57□□□□□ -2
CD44-234ENST00000531873 ROPN1Q9HAT0 212 aaPredicted RBP2.57□□□□□ -2
CD44-234ENST00000531873 SDF2L1Q9HCN8 221 aa2.57□□□□□ -2
CD44-234ENST00000531873 SLC35D1Q9NTN3 355 aa2.57□□□□□ -2
CD44-234ENST00000531873 ANKMY1Q9P2S6 941 aa2.57□□□□□ -2
CD44-234ENST00000531873 PLCL2Q9UPR0 1127 aa2.57□□□□□ -2
CD44-234ENST00000531873 WDR37Q9Y2I8 494 aa2.57□□□□□ -2
CD44-234ENST00000531873 PYGO1Q9Y3Y4 419 aa2.57□□□□□ -2
CD44-234ENST00000531873 SELENOKQ9Y6D0 94 aa2.57□□□□□ -2
CD44-234ENST00000531873 U3KQV3 271 aa2.57□□□□□ -2
CD44-234ENST00000531873 TCF20Q9UGU0 1960 aaKnown RBP2.56□□□□□ -2
CD44-234ENST00000531873 A0A087WW49 117 aa2.56□□□□□ -2
CD44-234ENST00000531873 hCG_38984A0A1B0GV85 526 aa2.56□□□□□ -2
CD44-234ENST00000531873 C15orf61A6NNL5 157 aa2.56□□□□□ -2
CD44-234ENST00000531873 G3V2L1 256 aa2.56□□□□□ -2
CD44-234ENST00000531873 CCSO14618 274 aa2.56□□□□□ -2
CD44-234ENST00000531873 CPLX1O14810 134 aa2.56□□□□□ -2
CD44-234ENST00000531873 SURF4O15260 269 aa2.56□□□□□ -2
CD44-234ENST00000531873 PCDH7O60245 1069 aa2.56□□□□□ -2
CD44-234ENST00000531873 PEX11AO75192 247 aa2.56□□□□□ -2
CD44-234ENST00000531873 AK1P00568 194 aa2.56□□□□□ -2
CD44-234ENST00000531873 PRSS1P07477 247 aa2.56□□□□□ -2
CD44-234ENST00000531873 GSTA2P09210 222 aa2.56□□□□□ -2
CD44-234ENST00000531873 PRKAR1AP10644 381 aa2.56□□□□□ -2
CD44-234ENST00000531873 CYP11B1P15538 503 aa2.56□□□□□ -2
CD44-234ENST00000531873 GNSP15586 552 aa2.56□□□□□ -2
CD44-234ENST00000531873 IL4RP24394 825 aa2.56□□□□□ -2
CD44-234ENST00000531873 OPRL1P41146 370 aa2.56□□□□□ -2
CD44-234ENST00000531873 SLC6A8P48029 635 aa2.56□□□□□ -2
CD44-234ENST00000531873 FHITP49789 147 aa2.56□□□□□ -2
CD44-234ENST00000531873 ZNF131P52739 623 aa2.56□□□□□ -2
CD44-234ENST00000531873 PAX9P55771 341 aa2.56□□□□□ -2
CD44-234ENST00000531873 GNB1P62873 340 aa2.56□□□□□ -2
CD44-234ENST00000531873 TRA2BP62995 288 aaKnown RBP2.56□□□□□ -2
CD44-234ENST00000531873 PHEXP78562 749 aa2.56□□□□□ -2
CD44-234ENST00000531873 RPL36AP83881 106 aaKnown RBP2.56□□□□□ -2
CD44-234ENST00000531873 GABPB1Q06547 395 aaPredicted RBP2.56□□□□□ -2
CD44-234ENST00000531873 CCDC6Q16204 474 aa2.56□□□□□ -2
CD44-234ENST00000531873 CARTPTQ16568 116 aa2.56□□□□□ -2
CD44-234ENST00000531873 DCAF12Q5T6F0 453 aa2.56□□□□□ -2
CD44-234ENST00000531873 ABRAXAS1Q6UWZ7 409 aa2.56□□□□□ -2
CD44-234ENST00000531873 ELMOD1Q8N336 334 aa2.56□□□□□ -2
CD44-234ENST00000531873 BCORP1Q8N888 145 aa2.56□□□□□ -2
CD44-234ENST00000531873 ATP8B4Q8TF62 1192 aa2.56□□□□□ -2
CD44-234ENST00000531873 SELENOMQ8WWX9 145 aa2.56□□□□□ -2
CD44-234ENST00000531873 TMEM190Q8WZ59 177 aa2.56□□□□□ -2
CD44-234ENST00000531873 TMEM45BQ96B21 275 aa2.56□□□□□ -2
CD44-234ENST00000531873 DTNBP1Q96EV8 351 aa2.56□□□□□ -2
CD44-234ENST00000531873 ZNF274Q96GC6 653 aaPredicted RBP2.56□□□□□ -2
CD44-234ENST00000531873 UHRF2Q96PU4 802 aa2.56□□□□□ -2
CD44-234ENST00000531873 NODALQ96S42 347 aa2.56□□□□□ -2
CD44-234ENST00000531873 FUCA2Q9BTY2 467 aa2.56□□□□□ -2
CD44-234ENST00000531873 PITPNM3Q9BZ71 974 aa2.56□□□□□ -2
CD44-234ENST00000531873 NMNAT2Q9BZQ4 307 aa2.56□□□□□ -2
CD44-234ENST00000531873 DPH5Q9H2P9 285 aa2.56□□□□□ -2
CD44-234ENST00000531873 COQ10BQ9H8M1 238 aa2.56□□□□□ -2
CD44-234ENST00000531873 ACTR8Q9H981 624 aa2.56□□□□□ -2
CD44-234ENST00000531873 C3orf14Q9HBI5 128 aa2.56□□□□□ -2
CD44-234ENST00000531873 HOMER3Q9NSC5 361 aa2.56□□□□□ -2
CD44-234ENST00000531873 MED17Q9NVC6 651 aa2.56□□□□□ -2
CD44-234ENST00000531873 CGNQ9P2M7 1197 aaKnown RBP2.56□□□□□ -2
CD44-234ENST00000531873 KLHDC2Q9Y2U9 406 aa2.56□□□□□ -2
CD44-234ENST00000531873 RAD54L2Q9Y4B4 1467 aa2.56□□□□□ -2
CD44-234ENST00000531873 A0A087X002 238 aa2.55□□□□□ -2
CD44-234ENST00000531873 A0A0U1RQV5 110 aa2.55□□□□□ -2
CD44-234ENST00000531873 NPIPB9F8W1W9 429 aa2.55□□□□□ -2
CD44-234ENST00000531873 CHEK1O14757 476 aa2.55□□□□□ -2
CD44-234ENST00000531873 ARPC1BO15143 372 aaKnown RBP2.55□□□□□ -2
CD44-234ENST00000531873 CEACAM4O75871 244 aa2.55□□□□□ -2
CD44-234ENST00000531873 APBB3O95704 486 aa2.55□□□□□ -2
CD44-234ENST00000531873 CAVIN2O95810 425 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms