RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 C7orf57Q8NEG2 295 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 APOBEC4Q8WW27 367 aaKnown RBP13.58□□□□□ -0.24
CPSF1-206ENST00000531480 METTL21AQ8WXB1 218 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 TANKQ92844 425 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 TSLPQ969D9 159 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 ANKRD9Q96BM1 317 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-206ENST00000531480 TM4SF18Q96CE8 201 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 VPS50Q96JG6 964 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 IMMP1LQ96LU5 166 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 C3orf30Q96M34 536 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 PTCHD1Q96NR3 888 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 CCDC134Q9H6E4 229 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 NECTIN3Q9NQS3 549 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 C1orf109Q9NX04 203 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 TEX10Q9NXF1 929 aaPredicted RBP13.58□□□□□ -0.24
CPSF1-206ENST00000531480 FBXW2Q9UKT8 454 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 MAN2B2Q9Y2E5 1009 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 TMED5Q9Y3A6 229 aa13.58□□□□□ -0.24
CPSF1-206ENST00000531480 PEX12O00623 359 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 PCDH7O60245 1069 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 AIFM1O95831 613 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 JUNP05412 331 aaKnown RBP13.57□□□□□ -0.24
CPSF1-206ENST00000531480 LINC00032P0C843 101 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 PRR35P0CG20 571 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 MAOAP21397 527 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 TLX1P31314 330 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-206ENST00000531480 BUD31P41223 144 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-206ENST00000531480 MAPK12P53778 367 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 RRADP55042 308 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 GNGT1P63211 74 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 BIKQ13323 160 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 TERF2Q15554 542 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 IMPG1Q17R60 797 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 SMU1Q2TAY7 513 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 DEFB109BQ30KR1 87 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 C18orf63Q68DL7 685 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 BORAQ6PGQ7 559 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 NDUFAF7Q7L592 441 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 CPEB2Q7Z5Q1 589 aaKnown RBP13.57□□□□□ -0.24
CPSF1-206ENST00000531480 EFCAB3Q8N7B9 438 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 DNAJB14Q8TBM8 379 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 AGR3Q8TD06 166 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 CKAP2Q8WWK9 683 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 C8orf44Q96CB5 159 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 WBP1Q96G27 269 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 FER1L6-AS2Q96M78 137 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 C7orf26Q96N11 449 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 RPF2Q9H7B2 306 aaKnown RBP13.57□□□□□ -0.24
CPSF1-206ENST00000531480 LRTM1Q9HBL6 345 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 PRTFDC1Q9NRG1 225 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 C19orf25Q9UFG5 118 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-206ENST00000531480 FBXL4Q9UKA2 621 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 CES1P1Q9UKY3 287 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 PPIEQ9UNP9 301 aaKnown RBP13.57□□□□□ -0.24
CPSF1-206ENST00000531480 WBP11Q9Y2W2 641 aaKnown RBP13.57□□□□□ -0.24
CPSF1-206ENST00000531480 FIS1Q9Y3D6 152 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 BAHCC1Q9P281 2608 aa13.57□□□□□ -0.24
CPSF1-206ENST00000531480 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 ERVH48-1M5A8F1 160 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 GUCY1B2O75343 617 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 PRB1P04280 392 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 NR2F6P10588 404 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 PPP2R1BP30154 601 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 CBX1P83916 185 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 BTKQ06187 659 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 AIMP2Q13155 320 aaKnown RBP13.56□□□□□ -0.24
CPSF1-206ENST00000531480 RFTN2Q52LD8 501 aaPredicted RBP13.56□□□□□ -0.24
CPSF1-206ENST00000531480 NDUFAF5Q5TEU4 345 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 CPZQ66K79 652 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 NOXRED1Q6NXP6 359 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 PCSK4Q6UW60 755 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 C19orf60Q96EN9 201 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 TUBB6Q9BUF5 446 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 ING2Q9H160 280 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 MEAF6Q9HAF1 191 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 PRM3Q9NNZ6 103 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 PFDN4Q9NQP4 134 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 RIC8BQ9NVN3 520 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 PNPOQ9NVS9 261 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 VTI1BQ9UEU0 232 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 TUBD1Q9UJT1 453 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 PCDHA9Q9Y5H5 950 aa13.56□□□□□ -0.24
CPSF1-206ENST00000531480 ARHGAP10A1A4S6 786 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 C1orf226A1L170 272 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 ZNF195O14628 629 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 FGF17O60258 216 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 PRKRAO75569 313 aaKnown RBP13.55□□□□□ -0.24
CPSF1-206ENST00000531480 VIMP08670 466 aaKnown RBP13.55□□□□□ -0.24
CPSF1-206ENST00000531480 DRD2P14416 443 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 HK2P52789 917 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 ZNF763Q0D2J5 394 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 Q0VFX4 171 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 SLC13A2Q13183 592 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 SERTAD2Q14140 314 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 NR6A1Q15406 480 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 SFT2D3Q587I9 215 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 SPDYAQ5MJ70 313 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 C6orf136Q5SQH8 315 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 MFSD4BQ5TF39 518 aa13.55□□□□□ -0.24
CPSF1-206ENST00000531480 PLAG1Q6DJT9 500 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms